Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48451 | Canola | nucleus | 56.6 | 86.93 |
| Bra040719.1-P | Field mustard | nucleus | 59.57 | 82.35 |
| KRH10635 | Soybean | nucleus | 64.68 | 61.04 |
| KRH42051 | Soybean | nucleus | 56.6 | 60.18 |
| CDX71166 | Canola | nucleus | 85.11 | 57.47 |
| AT4G37940.1 | Thale cress | nucleus | 51.91 | 53.51 |
| AT2G22630.2 | Thale cress | nucleus | 50.21 | 51.98 |
| AT3G57230.1 | Thale cress | nucleus | 52.77 | 51.67 |
| KRH21716 | Soybean | nucleus | 41.7 | 51.31 |
| AT5G60910.1 | Thale cress | nucleus | 34.04 | 33.06 |
| AT3G61120.1 | Thale cress | nucleus | 34.04 | 32.79 |
| AT1G26310.1 | Thale cress | nucleus | 35.32 | 32.55 |
| AT4G18960.1 | Thale cress | nucleus | 34.89 | 32.54 |
| AT1G69120.1 | Thale cress | nucleus | 34.89 | 32.03 |
| AT3G02310.1 | Thale cress | nucleus | 34.04 | 32.0 |
| AT2G45650.1 | Thale cress | nucleus | 33.62 | 31.35 |
| AT3G30260.1 | Thale cress | nucleus | 32.77 | 30.92 |
| AT5G15800.2 | Thale cress | nucleus | 34.47 | 30.92 |
| AT1G24260.2 | Thale cress | nucleus | 32.34 | 30.28 |
| AT2G42830.2 | Thale cress | nucleus | 31.91 | 30.24 |
| AT2G03710.1 | Thale cress | nucleus | 31.06 | 28.29 |
| AT3G58780.4 | Thale cress | nucleus | 32.77 | 27.4 |
| AT4G09960.4 | Thale cress | nucleus | 34.04 | 24.32 |
| KRH66116 | Soybean | nucleus, plastid | 4.26 | 12.66 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:815907 | UniProt:A0A1P8AYX0 | ProteinID:ANM61879.1 | Symbol:ANR1 |
| ArrayExpress:AT2G14210 | EnsemblPlantsGene:AT2G14210 | RefSeq:AT2G14210 | TAIR:AT2G14210 | RefSeq:AT2G14210-TAIR-G | EnsemblPlants:AT2G14210.2 |
| Unigene:At.126 | ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR002487 |
| InterPro:IPR036879 | InterPro:MADS_MEF2-like | RefSeq:NP_001324071.1 | PFAM:PF00319 | PFAM:PF01486 | PRINTS:PR00404 |
| ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF263 | SMART:SM00432 |
| SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000848F09A | SEG:seg |
Description
ANR1AGAMOUS-like 44 [Source:TAIR;Acc:AT2G14210]
Coordinates
chr2:+:6018558..6023863
Molecular Weight (calculated)
26919.6 Da
IEP (calculated)
10.219
GRAVY (calculated)
-0.617
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGKIVIRR IDNSTSRQVT FSKRRSGLLK KAKELSILCD AEVGVIIFSS TGKLYDYASN SSMKTIIERY NRVKEEQHQL LNHASEIKFW QREVASLQQQ
101: LQYLQECHRK LVGEELSGMN ANDLQNLEDQ LVTSLKGVRL KKDQLMTNEI RELNRKGQII QKENHELQNI VDIMRKENIK LQKKVHGRTN AIEGNSSVDP
201: ISNGTTTYAP PQLQLIQLQP APREKSIRLG ICLNL
101: LQYLQECHRK LVGEELSGMN ANDLQNLEDQ LVTSLKGVRL KKDQLMTNEI RELNRKGQII QKENHELQNI VDIMRKENIK LQKKVHGRTN AIEGNSSVDP
201: ISNGTTTYAP PQLQLIQLQP APREKSIRLG ICLNL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.