Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04164 | Canola | nucleus | 86.82 | 86.82 |
| CDY51202 | Canola | nucleus | 84.5 | 84.82 |
| Bra025126.1-P | Field mustard | nucleus | 84.5 | 84.82 |
| CDY02978 | Canola | nucleus | 83.72 | 84.38 |
| Bra017376.1-P | Field mustard | nucleus | 78.68 | 83.54 |
| Bra026543.1-P | Field mustard | nucleus | 86.43 | 82.9 |
| TraesCS7B01G021100.1 | Wheat | nucleus | 19.77 | 77.27 |
| TraesCS7B01G020900.1 | Wheat | nucleus | 20.54 | 76.81 |
| CDY49686 | Canola | nucleus | 50.78 | 75.72 |
| CDY45709 | Canola | nucleus | 49.61 | 73.99 |
| CDY33113 | Canola | nucleus | 85.66 | 71.52 |
| VIT_01s0011g00110.t01 | Wine grape | nucleus | 58.14 | 61.73 |
| KRH70973 | Soybean | nucleus | 55.04 | 58.2 |
| Solyc04g005320.2.1 | Tomato | nucleus | 53.1 | 57.56 |
| KRH75123 | Soybean | nucleus | 54.65 | 57.32 |
| PGSC0003DMT400072891 | Potato | nucleus | 52.71 | 56.2 |
| Solyc05g012020.2.1 | Tomato | nucleus | 51.94 | 55.37 |
| AT5G15800.2 | Thale cress | nucleus | 55.04 | 54.2 |
| GSMUA_Achr8P28100_001 | Banana | nucleus | 49.61 | 53.33 |
| AT3G02310.1 | Thale cress | nucleus | 50.39 | 52.0 |
| AT1G24260.2 | Thale cress | nucleus | 49.61 | 51.0 |
| GSMUA_Achr7P26700_001 | Banana | nucleus | 46.51 | 50.42 |
| TraesCS4B01G245700.1 | Wheat | nucleus | 41.86 | 50.0 |
| Zm00001d045231_P002 | Maize | nucleus | 43.41 | 49.78 |
| GSMUA_Achr3P15930_001 | Banana | nucleus | 46.12 | 49.58 |
| TraesCS4D01G243700.1 | Wheat | nucleus | 42.64 | 48.89 |
| EER89250 | Sorghum | nucleus | 42.64 | 48.89 |
| TraesCS7D01G120500.1 | Wheat | nucleus | 42.25 | 48.02 |
| GSMUA_Achr4P14460_001 | Banana | nucleus | 44.57 | 47.92 |
| OQU93000 | Sorghum | nucleus | 44.96 | 47.74 |
| TraesCS7A01G122100.1 | Wheat | nucleus | 41.86 | 47.58 |
| Os06t0162800-01 | Rice | nucleus | 41.47 | 47.56 |
| GSMUA_Achr2P06250_001 | Banana | nucleus | 41.47 | 47.35 |
| TraesCS7B01G020800.1 | Wheat | nucleus | 41.47 | 47.14 |
| Os03t0215400-01 | Rice | nucleus | 46.12 | 46.3 |
| TraesCS7A01G122000.1 | Wheat | nucleus | 40.7 | 46.26 |
| TraesCS7D01G120600.1 | Wheat | nucleus | 40.31 | 45.81 |
| TraesCS4D01G245200.1 | Wheat | nucleus | 43.8 | 45.56 |
| Zm00001d028217_P001 | Maize | nucleus | 44.96 | 44.96 |
| Zm00001d048082_P001 | Maize | nucleus | 43.8 | 44.84 |
| TraesCS4A01G028200.1 | Wheat | nucleus | 40.31 | 44.83 |
| TraesCS4B01G245800.1 | Wheat | nucleus | 42.64 | 44.53 |
| TraesCS4D01G276100.1 | Wheat | nucleus | 41.09 | 43.98 |
| TraesCS4A01G028100.1 | Wheat | nucleus | 40.7 | 43.39 |
| TraesCS4A01G058900.1 | Wheat | nucleus | 28.29 | 42.94 |
| TraesCS4B01G277800.1 | Wheat | nucleus | 40.31 | 42.11 |
| AT2G45650.1 | Thale cress | nucleus | 40.7 | 41.67 |
| HORVU7Hr1G025700.6 | Barley | nucleus | 41.86 | 39.13 |
| AT3G61120.1 | Thale cress | nucleus | 36.05 | 38.11 |
| AT5G60910.1 | Thale cress | nucleus | 34.11 | 36.36 |
| HORVU4Hr1G067680.14 | Barley | nucleus | 39.53 | 35.92 |
| AT1G69120.1 | Thale cress | nucleus | 34.88 | 35.16 |
| AT1G26310.1 | Thale cress | nucleus | 34.11 | 34.51 |
| AT3G30260.1 | Thale cress | nucleus | 32.95 | 34.14 |
| AT2G42830.2 | Thale cress | nucleus | 32.17 | 33.47 |
| TraesCS4A01G078700.1 | Wheat | nucleus | 28.29 | 33.33 |
| AT4G18960.1 | Thale cress | nucleus | 32.56 | 33.33 |
| AT4G37940.1 | Thale cress | nucleus | 29.07 | 32.89 |
| TraesCS7B01G021000.1 | Wheat | nucleus | 23.64 | 32.62 |
| AT2G14210.2 | Thale cress | nucleus | 28.29 | 31.06 |
| AT3G57230.1 | Thale cress | nucleus | 28.29 | 30.42 |
| AT2G22630.2 | Thale cress | nucleus | 26.74 | 30.4 |
| AT3G58780.4 | Thale cress | nucleus | 31.78 | 29.18 |
| AT4G09960.4 | Thale cress | nucleus | 31.78 | 24.92 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:814898 | UniProt:A0A178VVE1 | ProteinID:AAD20073.1 | ProteinID:AEC05738.1 |
| ProteinID:AEC05739.1 | ProteinID:AEC05740.1 | ArrayExpress:AT2G03710 | EnsemblPlantsGene:AT2G03710 | RefSeq:AT2G03710 | TAIR:AT2G03710 |
| RefSeq:AT2G03710-TAIR-G | EnsemblPlants:AT2G03710.1 | TAIR:AT2G03710.1 | EMBL:AY063894 | EMBL:AY096386 | EMBL:AY141229 |
| Unigene:At.10200 | ncoils:Coil | GO:GO:0000003 | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 |
| GO:GO:0010076 | GO:GO:0030154 | GO:GO:0045944 | GO:GO:0046983 | GO:GO:0048440 | GO:GO:0048441 |
| GO:GO:0048442 | GO:GO:0048443 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 | InterPro:MADS_MEF2-like |
| RefSeq:NP_178466.1 | RefSeq:NP_849930.1 | RefSeq:NP_973411.1 | ProteinID:OAP10349.1 | UniProt:P29383 | PFAM:PF00319 |
| PFAM:PF01486 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020137 | PO:PO:0025022 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 |
| PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF352 | Symbol:SEP4 | SMART:SM00432 | SUPFAM:SSF55455 |
| InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | EMBL:U81369 | UniParc:UPI00001256C6 | SEG:seg |
Description
AGL3Agamous-like MADS-box protein AGL3 [Source:UniProtKB/Swiss-Prot;Acc:P29383]
Coordinates
chr2:+:1129268..1131838
Molecular Weight (calculated)
29575.0 Da
IEP (calculated)
9.251
GRAVY (calculated)
-0.824
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEIALLIFSN RGKLYEFCSS PSGMARTVDK YRKHSYATMD PNQSAKDLQD KYQDYLKLKS
101: RVEILQHSQR HLLGEELSEM DVNELEHLER QVDASLRQIR STKARSMLDQ LSDLKTKEEM LLETNRDLRR KLEDSDAALT QSFWGSSAAE QQQQHQQQQQ
201: GMSSYQSNPP IQEAGFFKPL QGNVALQMSS HYNHNPANAT NSATTSQNVN GFFPGWMV
101: RVEILQHSQR HLLGEELSEM DVNELEHLER QVDASLRQIR STKARSMLDQ LSDLKTKEEM LLETNRDLRR KLEDSDAALT QSFWGSSAAE QQQQHQQQQQ
201: GMSSYQSNPP IQEAGFFKPL QGNVALQMSS HYNHNPANAT NSATTSQNVN GFFPGWMV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.