Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH75123 | Soybean | nucleus | 95.9 | 95.12 |
| TraesCS7B01G021100.1 | Wheat | nucleus | 21.31 | 78.79 |
| KRH64836 | Soybean | nucleus | 19.26 | 78.33 |
| TraesCS7B01G020900.1 | Wheat | nucleus | 22.13 | 78.26 |
| KRH75125 | Soybean | nucleus | 19.26 | 77.05 |
| KRG97386 | Soybean | nucleus | 44.26 | 75.0 |
| VIT_01s0011g00110.t01 | Wine grape | nucleus | 69.67 | 69.96 |
| KRG93698 | Soybean | nucleus | 65.16 | 63.86 |
| PGSC0003DMT400072891 | Potato | nucleus | 63.11 | 63.64 |
| KRH18339 | Soybean | nucleus | 64.75 | 63.45 |
| Solyc05g012020.2.1 | Tomato | nucleus | 62.7 | 63.22 |
| KRH11093 | Soybean | nucleus | 19.26 | 62.67 |
| Solyc04g005320.2.1 | Tomato | nucleus | 61.07 | 62.6 |
| KRH45097 | Soybean | nucleus | 64.34 | 62.55 |
| KRH01380 | Soybean | nucleus | 64.34 | 61.57 |
| KRH56775 | Soybean | nucleus | 59.43 | 59.67 |
| KRH03170 | Soybean | nucleus | 59.43 | 59.67 |
| KRH58800 | Soybean | nucleus | 57.79 | 57.79 |
| KRH42695 | Soybean | nucleus | 56.97 | 56.97 |
| KRH31527 | Soybean | nucleus | 56.56 | 56.79 |
| Zm00001d045231_P002 | Maize | nucleus | 52.05 | 56.44 |
| TraesCS7D01G120500.1 | Wheat | nucleus | 51.64 | 55.51 |
| Bra025126.1-P | Field mustard | nucleus | 58.2 | 55.25 |
| EER89250 | Sorghum | nucleus | 50.82 | 55.11 |
| CDY02978 | Canola | nucleus | 57.79 | 55.08 |
| TraesCS7A01G122100.1 | Wheat | nucleus | 51.23 | 55.07 |
| TraesCS7A01G122000.1 | Wheat | nucleus | 51.23 | 55.07 |
| AT2G03710.1 | Thale cress | nucleus | 58.2 | 55.04 |
| CDY51202 | Canola | nucleus | 57.79 | 54.86 |
| KRH40560 | Soybean | nucleus | 34.84 | 54.84 |
| TraesCS4B01G245700.1 | Wheat | nucleus | 48.36 | 54.63 |
| TraesCS7B01G020800.1 | Wheat | nucleus | 50.82 | 54.63 |
| Os06t0162800-01 | Rice | nucleus | 50.0 | 54.22 |
| GSMUA_Achr8P28100_001 | Banana | nucleus | 53.28 | 54.17 |
| CDY04164 | Canola | nucleus | 56.97 | 53.88 |
| GSMUA_Achr7P26700_001 | Banana | nucleus | 52.05 | 53.36 |
| Bra026543.1-P | Field mustard | nucleus | 58.61 | 53.16 |
| GSMUA_Achr3P15930_001 | Banana | nucleus | 52.05 | 52.92 |
| GSMUA_Achr4P14460_001 | Banana | nucleus | 51.23 | 52.08 |
| TraesCS4D01G243700.1 | Wheat | nucleus | 47.95 | 52.0 |
| TraesCS7D01G120600.1 | Wheat | nucleus | 48.36 | 51.98 |
| OQU93000 | Sorghum | nucleus | 50.82 | 51.03 |
| KRH48304 | Soybean | nucleus | 49.59 | 49.39 |
| GSMUA_Achr2P06250_001 | Banana | nucleus | 45.49 | 49.12 |
| KRH14461 | Soybean | nucleus | 20.9 | 49.04 |
| Os03t0215400-01 | Rice | nucleus | 51.64 | 49.03 |
| KRH65193 | Soybean | nucleus | 48.77 | 48.57 |
| Bra017376.1-P | Field mustard | nucleus | 48.36 | 48.56 |
| TraesCS4A01G028200.1 | Wheat | nucleus | 45.9 | 48.28 |
| Zm00001d028217_P001 | Maize | nucleus | 50.82 | 48.06 |
| TraesCS4B01G245800.1 | Wheat | nucleus | 48.36 | 47.77 |
| Zm00001d048082_P001 | Maize | nucleus | 49.18 | 47.62 |
| TraesCS4A01G028100.1 | Wheat | nucleus | 47.13 | 47.52 |
| TraesCS4D01G276100.1 | Wheat | nucleus | 46.72 | 47.3 |
| TraesCS4D01G245200.1 | Wheat | nucleus | 47.54 | 46.77 |
| TraesCS4A01G058900.1 | Wheat | nucleus | 31.97 | 45.88 |
| KRH00622 | Soybean | nucleus | 44.67 | 45.61 |
| CDY33113 | Canola | nucleus | 57.38 | 45.31 |
| TraesCS4B01G277800.1 | Wheat | nucleus | 45.49 | 44.94 |
| HORVU7Hr1G025700.6 | Barley | nucleus | 49.59 | 43.84 |
| KRH54740 | Soybean | nucleus | 42.62 | 42.62 |
| CDY45709 | Canola | nucleus | 29.92 | 42.2 |
| CDY49686 | Canola | nucleus | 29.92 | 42.2 |
| KRH09173 | Soybean | nucleus | 40.57 | 41.95 |
| KRH63171 | Soybean | nucleus | 41.8 | 41.8 |
| KRG91419 | Soybean | nucleus | 39.34 | 41.74 |
| KRH03173 | Soybean | nucleus | 40.57 | 41.42 |
| KRH07467 | Soybean | nucleus | 39.75 | 41.1 |
| KRH45412 | Soybean | nucleus | 39.75 | 41.1 |
| KRH56774 | Soybean | nucleus | 40.98 | 40.98 |
| KRH35403 | Soybean | nucleus | 38.93 | 40.95 |
| KRH56460 | Soybean | nucleus | 36.48 | 40.09 |
| KRH70974 | Soybean | nucleus | 39.75 | 39.92 |
| TraesCS7B01G021000.1 | Wheat | nucleus | 29.92 | 39.04 |
| KRH38649 | Soybean | nucleus | 38.93 | 38.93 |
| KRH45099 | Soybean | nucleus | 38.93 | 38.31 |
| KRH01382 | Soybean | nucleus | 38.52 | 37.15 |
| KRG93701 | Soybean | nucleus | 36.48 | 36.48 |
| HORVU4Hr1G067680.14 | Barley | nucleus | 42.21 | 36.27 |
| KRH42051 | Soybean | nucleus | 32.38 | 35.75 |
| KRH39494 | Soybean | nucleus | 32.38 | 35.75 |
| KRH21150 | Soybean | nucleus | 35.25 | 35.39 |
| KRG98899 | Soybean | nucleus | 35.66 | 35.37 |
| KRH18331 | Soybean | nucleus | 35.25 | 35.25 |
| TraesCS4A01G078700.1 | Wheat | nucleus | 31.56 | 35.16 |
| KRH74451 | Soybean | nucleus | 31.97 | 35.14 |
| KRH73684 | Soybean | nucleus | 35.25 | 34.96 |
| KRH46066 | Soybean | nucleus | 35.25 | 34.82 |
| KRH42930 | Soybean | nucleus | 34.43 | 34.57 |
| KRH59043 | Soybean | nucleus | 33.61 | 33.74 |
| KRH10635 | Soybean | nucleus | 34.02 | 33.33 |
| KRH16883 | Soybean | nucleus | 32.38 | 33.05 |
| KRH72490 | Soybean | nucleus | 31.97 | 32.1 |
| KRH42047 | Soybean | nucleus | 30.74 | 31.12 |
| KRH64830 | Soybean | nucleus | 16.8 | 25.47 |
| KRH11095 | Soybean | nucleus | 15.16 | 22.16 |
| KRH21716 | Soybean | nucleus | 17.21 | 21.99 |
| KRH66116 | Soybean | nucleus, plastid | 2.87 | 8.86 |
Protein Annotations
| EntrezGene:100811049 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | EMBL:ACUP02000837 | ncoils:Coil | EnsemblPlantsGene:GLYMA_02G121500 |
| GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 | UniProt:K7K7W6 |
| EnsemblPlants:KRH70973 | ProteinID:KRH70973 | ProteinID:KRH70973.1 | InterPro:MADS_MEF2-like | PFAM:PF00319 | PFAM:PF01486 |
| PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF352 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000233793C |
Description
hypothetical protein
Coordinates
chr2:+:12065640..12082937
Molecular Weight (calculated)
28243.4 Da
IEP (calculated)
7.180
GRAVY (calculated)
-0.830
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSG HSMAKTLERY HRCSYGALEV QHQPEIETQR RYQEYLKLKS
101: RVEALQQTQR NLLGEELEHL DVKDLEQLER QLDSSLKQIR SNKTQQMLDQ LADLHRKEEM LLETNNILRN KLEEINVALQ PTWETREQNA PYNYHPSQSE
201: GYYETAHCNS TLRIGYDSSG LNEAGGAAGT SAQNASEFMN GWMN
101: RVEALQQTQR NLLGEELEHL DVKDLEQLER QLDSSLKQIR SNKTQQMLDQ LADLHRKEEM LLETNNILRN KLEEINVALQ PTWETREQNA PYNYHPSQSE
201: GYYETAHCNS TLRIGYDSSG LNEAGGAAGT SAQNASEFMN GWMN
001: MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEIALLIFSN RGKLYEFCSS PSGMARTVDK YRKHSYATMD PNQSAKDLQD KYQDYLKLKS
101: RVEILQHSQR HLLGEELSEM DVNELEHLER QVDASLRQIR STKARSMLDQ LSDLKTKEEM LLETNRDLRR KLEDSDAALT QSFWGSSAAE QQQQHQQQQQ
201: GMSSYQSNPP IQEAGFFKPL QGNVALQMSS HYNHNPANAT NSATTSQNVN GFFPGWMV
101: RVEILQHSQR HLLGEELSEM DVNELEHLER QVDASLRQIR STKARSMLDQ LSDLKTKEEM LLETNRDLRR KLEDSDAALT QSFWGSSAAE QQQQHQQQQQ
201: GMSSYQSNPP IQEAGFFKPL QGNVALQMSS HYNHNPANAT NSATTSQNVN GFFPGWMV
Arabidopsis Description
AGL3Agamous-like MADS-box protein AGL3 [Source:UniProtKB/Swiss-Prot;Acc:P29383]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.