Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH09173 | Soybean | nucleus | 88.52 | 91.53 |
| KRH75125 | Soybean | nucleus | 19.26 | 77.05 |
| KRH64836 | Soybean | nucleus | 17.62 | 71.67 |
| KRG91419 | Soybean | nucleus | 56.97 | 60.43 |
| KRH35403 | Soybean | nucleus | 57.38 | 60.34 |
| KRG97386 | Soybean | nucleus | 33.2 | 56.25 |
| KRH11093 | Soybean | nucleus | 16.8 | 54.67 |
| KRH40560 | Soybean | nucleus | 34.02 | 53.55 |
| VIT_16s0022g02330.t01 | Wine grape | nucleus | 46.31 | 45.38 |
| KRH48304 | Soybean | nucleus | 45.49 | 45.31 |
| KRH65193 | Soybean | nucleus | 45.08 | 44.9 |
| KRH00622 | Soybean | nucleus | 43.03 | 43.93 |
| KRH14461 | Soybean | nucleus | 18.03 | 42.31 |
| KRH42695 | Soybean | nucleus | 41.8 | 41.8 |
| KRH58800 | Soybean | nucleus | 41.39 | 41.39 |
| KRG93698 | Soybean | nucleus | 41.8 | 40.96 |
| KRH18339 | Soybean | nucleus | 41.8 | 40.96 |
| KRH31527 | Soybean | nucleus | 40.57 | 40.74 |
| KRH45097 | Soybean | nucleus | 41.39 | 40.24 |
| KRH01380 | Soybean | nucleus | 41.39 | 39.61 |
| KRH70973 | Soybean | nucleus | 38.93 | 38.93 |
| KRH75123 | Soybean | nucleus | 38.52 | 38.21 |
| KRH54740 | Soybean | nucleus | 38.11 | 38.11 |
| KRH56775 | Soybean | nucleus | 37.7 | 37.86 |
| KRH07467 | Soybean | nucleus | 36.48 | 37.71 |
| KRH63171 | Soybean | nucleus | 37.3 | 37.3 |
| KRH45412 | Soybean | nucleus | 36.07 | 37.29 |
| KRH03170 | Soybean | nucleus | 36.89 | 37.04 |
| KRH03173 | Soybean | nucleus | 36.07 | 36.82 |
| KRH56774 | Soybean | nucleus | 36.07 | 36.07 |
| KRH45099 | Soybean | nucleus | 36.48 | 35.89 |
| KRH70974 | Soybean | nucleus | 35.66 | 35.8 |
| KRH18331 | Soybean | nucleus | 34.84 | 34.84 |
| KRH74451 | Soybean | nucleus | 31.56 | 34.68 |
| KRH01382 | Soybean | nucleus | 35.66 | 34.39 |
| KRH56460 | Soybean | nucleus | 31.15 | 34.23 |
| KRG93701 | Soybean | nucleus | 34.02 | 34.02 |
| KRH39494 | Soybean | nucleus | 30.33 | 33.48 |
| KRH16883 | Soybean | nucleus | 32.38 | 33.05 |
| KRH42051 | Soybean | nucleus | 29.51 | 32.58 |
| KRH10635 | Soybean | nucleus | 31.97 | 31.33 |
| KRH72490 | Soybean | nucleus | 31.15 | 31.28 |
| KRH21150 | Soybean | nucleus | 31.15 | 31.28 |
| KRH73684 | Soybean | nucleus | 31.15 | 30.89 |
| KRG98899 | Soybean | nucleus | 31.15 | 30.89 |
| KRH46066 | Soybean | nucleus | 31.15 | 30.77 |
| KRH42930 | Soybean | nucleus | 30.33 | 30.45 |
| KRH42047 | Soybean | nucleus | 29.92 | 30.29 |
| KRH59043 | Soybean | nucleus | 29.1 | 29.22 |
| KRH11095 | Soybean | nucleus | 15.16 | 22.16 |
| KRH64830 | Soybean | nucleus | 14.34 | 21.74 |
| KRH21716 | Soybean | nucleus | 14.75 | 18.85 |
| KRH66116 | Soybean | nucleus, plastid | 2.46 | 7.59 |
Protein Annotations
| EntrezGene:100793681 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | EMBL:ACUP02005862 | ncoils:Coil | EnsemblPlantsGene:GLYMA_09G149000 |
| GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 | UniProt:K7LE08 |
| EnsemblPlants:KRH38649 | ProteinID:KRH38649 | ProteinID:KRH38649.1 | InterPro:MADS_MEF2-like | PFAM:PF00319 | PFAM:PF01486 |
| PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF146 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000294C77A |
Description
hypothetical protein
Coordinates
chr9:-:36810521..36820188
Molecular Weight (calculated)
28604.8 Da
IEP (calculated)
8.784
GRAVY (calculated)
-0.850
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGRVVLER IENKINRQVT FSKRRSGLLK KAFELSVLCD AEVGLIIFSS RGKLFQYSST DITKIIERYR QCRYSKSHTG DSLEHDSQSA YHEFLKLRAK
101: YESLERTQRH FQGEDLEPLS FKDLQSLEKQ LDITLALTRQ HQTKKLMARA DELREKVHKL EDLNKQLESK VFSLNNHEKD EFSSLILDNN NYIQMHATQV
201: DQFESETALN TCRFQHQEVV SKEKAIDTRT EHSQSSHNKN NGWL
101: YESLERTQRH FQGEDLEPLS FKDLQSLEKQ LDITLALTRQ HQTKKLMARA DELREKVHKL EDLNKQLESK VFSLNNHEKD EFSSLILDNN NYIQMHATQV
201: DQFESETALN TCRFQHQEVV SKEKAIDTRT EHSQSSHNKN NGWL
001: MGRGRVEMKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKLYEFGSV GIESTIERYN RCYNCSLSNN KPEETTQSWC QEVTKLKSKY
101: ESLVRTNRNL LGEDLGEMGV KELQALERQL EAALTATRQR KTQVMMEEME DLRKKERQLG DINKQLKIKF ETEGHAFKTF QDLWANSAAS VAGDPNNSEF
201: PVEPSHPNVL DCNTEPFLQI GFQQHYYVQG EGSSVSKSNV AGETNFVQGW VL
101: ESLVRTNRNL LGEDLGEMGV KELQALERQL EAALTATRQR KTQVMMEEME DLRKKERQLG DINKQLKIKF ETEGHAFKTF QDLWANSAAS VAGDPNNSEF
201: PVEPSHPNVL DCNTEPFLQI GFQQHYYVQG EGSSVSKSNV AGETNFVQGW VL
Arabidopsis Description
AGL6AGAMOUS-like protein 6 [Source:UniProtKB/TrEMBL;Acc:Q1PEU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.