Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH16883 | Soybean | nucleus | 87.24 | 88.7 |
| VIT_18s0001g07900.t01 | Wine grape | nucleus | 70.37 | 71.25 |
| Solyc04g076700.2.1 | Tomato | nucleus | 37.45 | 68.94 |
| KRH64836 | Soybean | nucleus | 16.46 | 66.67 |
| KRH39494 | Soybean | nucleus | 58.85 | 64.71 |
| KRH74451 | Soybean | nucleus | 58.44 | 63.96 |
| PGSC0003DMT400024193 | Potato | nucleus | 46.91 | 63.69 |
| KRH10635 | Soybean | nucleus | 64.61 | 63.05 |
| KRH75125 | Soybean | nucleus | 15.23 | 60.66 |
| KRH42051 | Soybean | nucleus | 53.5 | 58.82 |
| KRH11093 | Soybean | nucleus | 16.46 | 53.33 |
| KRH21716 | Soybean | nucleus | 40.74 | 51.83 |
| PGSC0003DMT400005159 | Potato | nucleus | 44.03 | 50.47 |
| Solyc12g088090.1.1 | Tomato | nucleus | 44.44 | 48.65 |
| KRH42047 | Soybean | nucleus | 47.74 | 48.13 |
| KRG97386 | Soybean | nucleus | 27.57 | 46.53 |
| KRH14461 | Soybean | nucleus | 19.34 | 45.19 |
| KRH40560 | Soybean | nucleus | 26.75 | 41.94 |
| KRH56460 | Soybean | nucleus | 34.98 | 38.29 |
| KRH21150 | Soybean | nucleus | 37.45 | 37.45 |
| KRH42930 | Soybean | nucleus | 36.21 | 36.21 |
| KRH42695 | Soybean | nucleus | 35.39 | 35.25 |
| KRH58800 | Soybean | nucleus | 34.98 | 34.84 |
| KRH59043 | Soybean | nucleus | 34.57 | 34.57 |
| KRG91419 | Soybean | nucleus | 31.28 | 33.04 |
| KRH73684 | Soybean | nucleus | 33.33 | 32.93 |
| KRH31527 | Soybean | nucleus | 32.92 | 32.92 |
| KRH45097 | Soybean | nucleus | 33.74 | 32.67 |
| KRG93698 | Soybean | nucleus | 33.33 | 32.53 |
| KRH18339 | Soybean | nucleus | 33.33 | 32.53 |
| KRH35403 | Soybean | nucleus | 30.86 | 32.33 |
| KRH48304 | Soybean | nucleus | 32.51 | 32.24 |
| KRH00622 | Soybean | nucleus | 31.69 | 32.22 |
| KRH45412 | Soybean | nucleus | 31.28 | 32.2 |
| KRG98899 | Soybean | nucleus | 32.51 | 32.11 |
| KRH56775 | Soybean | nucleus | 32.1 | 32.1 |
| KRH46066 | Soybean | nucleus | 32.51 | 31.98 |
| KRH70973 | Soybean | nucleus | 32.1 | 31.97 |
| KRH65193 | Soybean | nucleus | 32.1 | 31.84 |
| KRH09173 | Soybean | nucleus | 30.86 | 31.78 |
| KRH07467 | Soybean | nucleus | 30.86 | 31.78 |
| KRH01380 | Soybean | nucleus | 33.33 | 31.76 |
| KRH03170 | Soybean | nucleus | 31.69 | 31.69 |
| KRH63171 | Soybean | nucleus | 31.28 | 31.15 |
| KRH38649 | Soybean | nucleus | 31.28 | 31.15 |
| KRH70974 | Soybean | nucleus | 30.86 | 30.86 |
| KRH75123 | Soybean | nucleus | 30.86 | 30.49 |
| KRH54740 | Soybean | nucleus | 30.45 | 30.33 |
| KRH45099 | Soybean | nucleus | 30.04 | 29.44 |
| KRH11095 | Soybean | nucleus | 20.16 | 29.34 |
| KRH03173 | Soybean | nucleus | 28.81 | 29.29 |
| KRH64830 | Soybean | nucleus | 19.34 | 29.19 |
| KRH56774 | Soybean | nucleus | 28.81 | 28.69 |
| KRH01382 | Soybean | nucleus | 29.63 | 28.46 |
| KRG93701 | Soybean | nucleus | 27.98 | 27.87 |
| KRH18331 | Soybean | nucleus | 25.93 | 25.82 |
| KRH66116 | Soybean | nucleus, plastid | 3.29 | 10.13 |
Protein Annotations
| EntrezGene:100778970 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | UniProt:A0A0R0L5G2 | EMBL:ACUP02001216 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_02G216600 | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 |
| ProteinID:KRH72489.1 | EnsemblPlants:KRH72490 | ProteinID:KRH72490 | ProteinID:KRH72490.1 | InterPro:MADS_MEF2-like | PFAM:PF00319 |
| PFAM:PF01486 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF263 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf |
| UniParc:UPI0003DE76E5 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:40345450..40366581
Molecular Weight (calculated)
27629.4 Da
IEP (calculated)
10.028
GRAVY (calculated)
-0.573
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGVMIFSS TGKLYDFASS SMKSVMDRYS KSKEEPCQLG SSASEIKFWQ REAAMLRQQL
101: HNLQESHRKM MGEELSGLTV KELQNLENQL EISLHGVRMK KDQLLMGEIQ ELNRKGNLIH QENVELYKKV YGTQDDNETN RDSVLTNGLG IGEDLQVPVN
201: LQLSQPQQQQ QHYKASSGTT KLGLPRRFLL GFVGLPRSSL IFW
101: HNLQESHRKM MGEELSGLTV KELQNLENQL EISLHGVRMK KDQLLMGEIQ ELNRKGNLIH QENVELYKKV YGTQDDNETN RDSVLTNGLG IGEDLQVPVN
201: LQLSQPQQQQ QHYKASSGTT KLGLPRRFLL GFVGLPRSSL IFW
001: MGRGKIVIQK IDDSTSRQVT FSKRRKGLIK KAKELAILCD AEVCLIIFSN TDKLYDFASS SVKSTIERFN TAKMEEQELM NPASEVKFWQ REAETLRQEL
101: HSLQENYRQL TGVELNGLSV KELQNIESQL EMSLRGIRMK REQILTNEIK ELTRKRNLVH HENLELSRKV QRIHQENVEL YKKAYGTSNT NGLGHHELVD
201: AVYESHAQVR LQLSQPEQSH YKTSSNS
101: HSLQENYRQL TGVELNGLSV KELQNIESQL EMSLRGIRMK REQILTNEIK ELTRKRNLVH HENLELSRKV QRIHQENVEL YKKAYGTSNT NGLGHHELVD
201: AVYESHAQVR LQLSQPEQSH YKTSSNS
Arabidopsis Description
AGL17AGL17 [Source:UniProtKB/TrEMBL;Acc:A0A178W215]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.