Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH59043 | Soybean | nucleus | 94.65 | 94.65 |
| KRH64836 | Soybean | nucleus | 23.05 | 93.33 |
| KRH11093 | Soybean | nucleus | 27.98 | 90.67 |
| KRH21150 | Soybean | nucleus | 82.72 | 82.72 |
| KRH11095 | Soybean | nucleus | 52.67 | 76.65 |
| KRH14461 | Soybean | nucleus | 31.69 | 74.04 |
| KRH75125 | Soybean | nucleus | 18.52 | 73.77 |
| VIT_10s0003g02070.t01 | Wine grape | nucleus | 68.31 | 73.45 |
| PGSC0003DMT400073134 | Potato | nucleus | 70.37 | 68.95 |
| Solyc02g071730.2.1 | Tomato | nucleus | 69.96 | 68.55 |
| GSMUA_Achr10P... | Banana | nucleus | 61.73 | 65.5 |
| CDY09267 | Canola | nucleus | 66.26 | 64.66 |
| GSMUA_Achr5P06590_001 | Banana | nucleus | 45.68 | 63.43 |
| AT4G18960.1 | Thale cress | nucleus | 65.43 | 63.1 |
| CDX78909 | Canola | nucleus | 65.43 | 63.1 |
| Bra013364.1-P | Field mustard | nucleus | 65.43 | 63.1 |
| CDX98597 | Canola | nucleus | 65.02 | 62.95 |
| Bra012564.1-P | Field mustard | nucleus | 64.61 | 62.55 |
| KRH73684 | Soybean | nucleus | 62.96 | 62.2 |
| KRG98899 | Soybean | nucleus | 62.14 | 61.38 |
| KRH56460 | Soybean | nucleus | 55.97 | 61.26 |
| KRH46066 | Soybean | nucleus | 62.14 | 61.13 |
| GSMUA_Achr6P14760_001 | Banana | nucleus | 60.91 | 58.27 |
| TraesCS1B01G144800.1 | Wheat | nucleus | 59.26 | 53.53 |
| TraesCS1D01G127700.1 | Wheat | nucleus | 58.85 | 53.16 |
| TraesCS1A01G125800.1 | Wheat | nucleus | 58.44 | 52.79 |
| TraesCS3D01G140200.2 | Wheat | nucleus | 59.26 | 52.55 |
| EES00105 | Sorghum | nucleus | 58.02 | 52.42 |
| Os01t0201700-02 | Rice | nucleus | 59.26 | 52.17 |
| HORVU3Hr1G026650.1 | Barley | nucleus | 58.02 | 52.03 |
| TraesCS3A01G314300.1 | Wheat | nucleus | 58.44 | 52.01 |
| Zm00001d039434_P001 | Maize | nucleus | 55.97 | 51.91 |
| CDX99406 | Canola | nucleus | 65.84 | 51.28 |
| TraesCS5B01G115100.1 | Wheat | nucleus | 53.09 | 51.19 |
| TraesCS1D01G262700.1 | Wheat | nucleus | 52.26 | 50.8 |
| HORVU1Hr1G023620.1 | Barley | nucleus | 52.67 | 50.79 |
| TraesCS5D01G118200.1 | Wheat | nucleus | 52.26 | 50.4 |
| TraesCS5A01G117500.1 | Wheat | nucleus | 52.67 | 50.39 |
| Zm00001d023955_P003 | Maize | nucleus | 54.32 | 49.81 |
| Os05t0203800-02 | Rice | nucleus | 55.56 | 49.63 |
| Zm00001d042591_P002 | Maize | nucleus | 54.73 | 49.63 |
| TraesCS1B01G273300.1 | Wheat | nucleus | 51.85 | 49.41 |
| KRG97386 | Soybean | nucleus | 29.22 | 49.31 |
| EES15827 | Sorghum | nucleus | 54.32 | 49.07 |
| Os12t0207000-01 | Rice | nucleus | 53.91 | 48.52 |
| KRH64830 | Soybean | nucleus | 32.1 | 48.45 |
| EES01878 | Sorghum | nucleus | 54.73 | 48.01 |
| Os01t0886200-01 | Rice | nucleus | 52.26 | 47.92 |
| GSMUA_Achr10P... | Banana | nucleus | 62.55 | 47.65 |
| Zm00001d041781_P001 | Maize | nucleus | 55.14 | 46.69 |
| TraesCS1A01G262700.1 | Wheat | endoplasmic reticulum | 52.26 | 46.18 |
| OQU77603 | Sorghum | nucleus | 55.14 | 45.89 |
| TraesCS3B01G157500.4 | Wheat | nucleus | 58.44 | 45.81 |
| HORVU1Hr1G029220.1 | Barley | nucleus | 58.44 | 43.56 |
| KRH40560 | Soybean | nucleus | 27.57 | 43.23 |
| Zm00001d037737_P001 | Maize | nucleus | 53.91 | 42.81 |
| KRH42051 | Soybean | nucleus | 35.8 | 39.37 |
| Zm00001d008882_P001 | Maize | nucleus | 53.09 | 39.21 |
| KRH16883 | Soybean | nucleus | 37.45 | 38.08 |
| KRH03170 | Soybean | nucleus | 37.04 | 37.04 |
| KRH56775 | Soybean | nucleus | 36.63 | 36.63 |
| KRH58800 | Soybean | nucleus | 36.63 | 36.48 |
| KRH42695 | Soybean | nucleus | 36.63 | 36.48 |
| KRH72490 | Soybean | nucleus | 36.21 | 36.21 |
| KRH10635 | Soybean | nucleus | 37.04 | 36.14 |
| KRH48304 | Soybean | nucleus | 36.21 | 35.92 |
| KRH74451 | Soybean | nucleus | 32.51 | 35.59 |
| KRH65193 | Soybean | nucleus | 35.8 | 35.51 |
| KRH31527 | Soybean | nucleus | 35.39 | 35.39 |
| KRH39494 | Soybean | nucleus | 32.1 | 35.29 |
| KRH42047 | Soybean | nucleus | 34.98 | 35.27 |
| KRH07467 | Soybean | nucleus | 34.16 | 35.17 |
| KRH45412 | Soybean | nucleus | 34.16 | 35.17 |
| KRH45097 | Soybean | nucleus | 35.8 | 34.66 |
| KRH01380 | Soybean | nucleus | 36.21 | 34.51 |
| KRH70973 | Soybean | nucleus | 34.57 | 34.43 |
| KRH70974 | Soybean | nucleus | 34.16 | 34.16 |
| KRH18339 | Soybean | nucleus | 34.98 | 34.14 |
| KRG93698 | Soybean | nucleus | 34.98 | 34.14 |
| KRH75123 | Soybean | nucleus | 33.74 | 33.33 |
| KRH63171 | Soybean | nucleus | 33.33 | 33.2 |
| KRH54740 | Soybean | nucleus | 33.33 | 33.2 |
| KRH00622 | Soybean | nucleus | 32.51 | 33.05 |
| KRH03173 | Soybean | nucleus | 32.1 | 32.64 |
| KRH56774 | Soybean | nucleus | 32.1 | 31.97 |
| KRH09173 | Soybean | nucleus | 30.86 | 31.78 |
| KRG91419 | Soybean | nucleus | 29.22 | 30.87 |
| KRH35403 | Soybean | nucleus | 29.22 | 30.6 |
| KRG93701 | Soybean | nucleus | 30.45 | 30.33 |
| KRH38649 | Soybean | nucleus | 30.45 | 30.33 |
| KRH45099 | Soybean | nucleus | 30.86 | 30.24 |
| KRH01382 | Soybean | nucleus | 30.45 | 29.25 |
| KRH18331 | Soybean | nucleus | 29.22 | 29.1 |
| KRH21716 | Soybean | nucleus | 18.52 | 23.56 |
| KRH66116 | Soybean | nucleus, plastid | 2.06 | 6.33 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EMBL:ACUP02004841 | ncoils:Coil | EnsemblPlantsGene:GLYMA_08G120600 | GO:GO:0000977 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 |
| GO:GO:0046983 | UniProt:I1KSJ1 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 | EnsemblPlants:KRH42930 |
| ProteinID:KRH42930 | ProteinID:KRH42930.1 | ProteinID:KRH42931.1 | InterPro:MADS_MEF2-like | PFAM:PF00319 | PFAM:PF01486 |
| PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF187 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00023390EB |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:9300246..9307879
Molecular Weight (calculated)
27592.7 Da
IEP (calculated)
10.258
GRAVY (calculated)
-0.844
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFPNQSMSS ESPQRKMGRG KIEIKRIENT TSRQVTFCKR RNGLLKKAYE LSVLCDAEVA LIVFSNRGRL YEYANNSVKA SIERYKKASS DSSSGGRSAS
101: EANAQFYQQE AAKLRVQISN LQNHNRQMMG EGLSTMNGKD LKNLETKLEK GISRIRSKKN EMLFAEIEHM KKREIYLHND NQLLRAKIGE GERSHHNVNG
201: LSGTTSYESM QSQFDSRGFF QVTGLQPNNN NQYAGQDMSL QFV
101: EANAQFYQQE AAKLRVQISN LQNHNRQMMG EGLSTMNGKD LKNLETKLEK GISRIRSKKN EMLFAEIEHM KKREIYLHND NQLLRAKIGE GERSHHNVNG
201: LSGTTSYESM QSQFDSRGFF QVTGLQPNNN NQYAGQDMSL QFV
001: MEGGASNEVA ESSKKIGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL VIFSTRGRLY EYANNSVRGT IERYKKACSD AVNPPTITEA
101: NTQYYQQEAS KLRRQIRDIQ NLNRHILGES LGSLNFKELK NLESRLEKGI SRVRSKKHEM LVAEIEYMQK REIELQNDNM YLRSKITERT GLQQQESSVI
201: HQGTVYESGV TSSHQSGQYN RNYIAVNLLE PNQNSSNQDQ PPLQLV
101: NTQYYQQEAS KLRRQIRDIQ NLNRHILGES LGSLNFKELK NLESRLEKGI SRVRSKKHEM LVAEIEYMQK REIELQNDNM YLRSKITERT GLQQQESSVI
201: HQGTVYESGV TSSHQSGQYN RNYIAVNLLE PNQNSSNQDQ PPLQLV
Arabidopsis Description
SHP2K-box region and MADS-box transcription factor family protein [Source:TAIR;Acc:AT2G42830]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.