Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH35403 | Soybean | nucleus | 89.57 | 88.79 |
| KRH75125 | Soybean | nucleus | 20.0 | 75.41 |
| KRH64836 | Soybean | nucleus | 18.7 | 71.67 |
| KRH09173 | Soybean | nucleus | 60.87 | 59.32 |
| KRH38649 | Soybean | nucleus | 60.43 | 56.97 |
| KRH11093 | Soybean | nucleus | 18.26 | 56.0 |
| KRG97386 | Soybean | nucleus | 34.35 | 54.86 |
| KRH40560 | Soybean | nucleus | 35.65 | 52.9 |
| KRH14461 | Soybean | nucleus | 20.0 | 44.23 |
| KRH00622 | Soybean | nucleus | 41.74 | 40.17 |
| VIT_16s0022g02330.t01 | Wine grape | nucleus | 43.48 | 40.16 |
| KRH48304 | Soybean | nucleus | 42.61 | 40.0 |
| KRH65193 | Soybean | nucleus | 42.61 | 40.0 |
| KRH31527 | Soybean | nucleus | 41.74 | 39.51 |
| KRH42695 | Soybean | nucleus | 41.74 | 39.34 |
| KRH70973 | Soybean | nucleus | 41.74 | 39.34 |
| KRH58800 | Soybean | nucleus | 41.3 | 38.93 |
| KRH75123 | Soybean | nucleus | 41.3 | 38.62 |
| KRH45097 | Soybean | nucleus | 40.43 | 37.05 |
| KRH18339 | Soybean | nucleus | 40.0 | 36.95 |
| KRG93698 | Soybean | nucleus | 40.0 | 36.95 |
| KRH56775 | Soybean | nucleus | 38.7 | 36.63 |
| KRH01380 | Soybean | nucleus | 40.43 | 36.47 |
| KRH03170 | Soybean | nucleus | 38.26 | 36.21 |
| KRH54740 | Soybean | nucleus | 37.83 | 35.66 |
| KRH56460 | Soybean | nucleus | 33.91 | 35.14 |
| KRH03173 | Soybean | nucleus | 36.09 | 34.73 |
| KRH07467 | Soybean | nucleus | 35.22 | 34.32 |
| KRH74451 | Soybean | nucleus | 33.04 | 34.23 |
| KRH63171 | Soybean | nucleus | 36.09 | 34.02 |
| KRH45412 | Soybean | nucleus | 34.78 | 33.9 |
| KRH42051 | Soybean | nucleus | 32.17 | 33.48 |
| KRH56774 | Soybean | nucleus | 35.22 | 33.2 |
| KRH39494 | Soybean | nucleus | 31.74 | 33.03 |
| KRH70974 | Soybean | nucleus | 33.91 | 32.1 |
| KRH45099 | Soybean | nucleus | 34.35 | 31.85 |
| KRH10635 | Soybean | nucleus | 33.91 | 31.33 |
| KRH72490 | Soybean | nucleus | 33.04 | 31.28 |
| KRH16883 | Soybean | nucleus | 32.17 | 30.96 |
| KRH01382 | Soybean | nucleus | 33.04 | 30.04 |
| KRG93701 | Soybean | nucleus | 31.74 | 29.92 |
| KRH18331 | Soybean | nucleus | 31.74 | 29.92 |
| KRH73684 | Soybean | nucleus | 31.74 | 29.67 |
| KRH42047 | Soybean | nucleus | 30.87 | 29.46 |
| KRG98899 | Soybean | nucleus | 31.3 | 29.27 |
| KRH21150 | Soybean | nucleus | 30.87 | 29.22 |
| KRH42930 | Soybean | nucleus | 30.87 | 29.22 |
| KRH46066 | Soybean | nucleus | 31.3 | 29.15 |
| KRH59043 | Soybean | nucleus | 30.0 | 28.4 |
| KRH64830 | Soybean | nucleus | 15.65 | 22.36 |
| KRH11095 | Soybean | nucleus | 14.35 | 19.76 |
| KRH21716 | Soybean | nucleus | 15.65 | 18.85 |
| KRH66116 | Soybean | nucleus, plastid | 0.43 | 1.27 |
Protein Annotations
| EntrezGene:100778860 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | EMBL:ACUP02012684 | ncoils:Coil | EnsemblPlantsGene:GLYMA_20G153700 |
| GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0045944 | GO:GO:0046983 | UniProt:I1NGN5 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 |
| EnsemblPlants:KRG91419 | ProteinID:KRG91419 | ProteinID:KRG91419.1 | InterPro:MADS_MEF2-like | PFAM:PF00319 | PFAM:PF01486 |
| PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF146 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000233DE19 |
Description
hypothetical protein
Coordinates
chr20:+:39266046..39272533
Molecular Weight (calculated)
26574.8 Da
IEP (calculated)
9.315
GRAVY (calculated)
-0.716
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGKVVLER IQNKINRQVT FSKRRNGLLK KAFELSVLCD AEIALIIFSS RGKLFQYSST DINRIIDKYR QCCFNMSQTG DVTEHQSEQC LYQELLILRV
101: KHESLQRTQR NLLGEELEPL SMKELHSLEK QLDRTLGQAR KHLTQKLISR IDELHGKVHN LEQVNKHLES QERGKCTQTC EGSANSHIRL QDAQVNQFES
201: ETTGSFRLQQ EQTTASKGKE SSHNINILRL
101: KHESLQRTQR NLLGEELEPL SMKELHSLEK QLDRTLGQAR KHLTQKLISR IDELHGKVHN LEQVNKHLES QERGKCTQTC EGSANSHIRL QDAQVNQFES
201: ETTGSFRLQQ EQTTASKGKE SSHNINILRL
001: MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS SSMLRTLERY QKCNYGAPEP NVPSREALAE LSSQQEYLKL
101: KERYDALQRT QRNLLGEDLG PLSTKELESL ERQLDSSLKQ IRALRTQFML DQLNDLQSKE RMLTETNKTL RLRLADGYQM PLQLNPNQEE VDHYGRHHHQ
201: QQQHSQAFFQ PLECEPILQI GYQGQQDGMG AGPSVNNYML GWLPYDTNSI
101: KERYDALQRT QRNLLGEDLG PLSTKELESL ERQLDSSLKQ IRALRTQFML DQLNDLQSKE RMLTETNKTL RLRLADGYQM PLQLNPNQEE VDHYGRHHHQ
201: QQQHSQAFFQ PLECEPILQI GYQGQQDGMG AGPSVNNYML GWLPYDTNSI
Arabidopsis Description
SEP3At1g24260 [Source:UniProtKB/TrEMBL;Acc:B4F7R9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.