Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH56460 | Soybean | nucleus | 96.89 | 70.27 |
| VIT_18s0041g01880.t01 | Wine grape | nucleus | 77.64 | 56.05 |
| KRH11095 | Soybean | nucleus | 50.93 | 49.1 |
| Solyc06g064840.2.1 | Tomato | nucleus | 60.25 | 48.26 |
| Bra037895.1-P | Field mustard | nucleus | 68.32 | 47.83 |
| Bra000696.1-P | Field mustard | nucleus | 65.84 | 45.89 |
| PGSC0003DMT400013248 | Potato | nucleus | 60.87 | 42.24 |
| Solyc11g028020.1.1 | Tomato | nucleus | 58.39 | 42.15 |
| GSMUA_Achr10P... | Banana | nucleus | 60.25 | 41.45 |
| CDY71878 | Canola | endoplasmic reticulum | 67.08 | 41.06 |
| PGSC0003DMT400065614 | Potato | nucleus | 58.39 | 40.52 |
| GSMUA_Achr7P23690_001 | Banana | nucleus | 59.63 | 40.17 |
| GSMUA_Achr5P16870_001 | Banana | nucleus, plastid | 62.73 | 35.56 |
| AT4G09960.4 | Thale cress | nucleus | 70.19 | 34.35 |
| KRH21150 | Soybean | nucleus | 50.93 | 33.74 |
| KRH73684 | Soybean | nucleus | 51.55 | 33.74 |
| KRG98899 | Soybean | nucleus | 50.31 | 32.93 |
| KRH46066 | Soybean | nucleus | 50.31 | 32.79 |
| KRH42930 | Soybean | nucleus | 48.45 | 32.1 |
| KRH59043 | Soybean | nucleus | 46.58 | 30.86 |
| KRH21716 | Soybean | nucleus | 28.57 | 24.08 |
| KRH16883 | Soybean | nucleus | 31.68 | 21.34 |
| KRG97386 | Soybean | nucleus | 18.01 | 20.14 |
| KRH42051 | Soybean | nucleus | 27.33 | 19.91 |
| KRH72490 | Soybean | nucleus | 29.19 | 19.34 |
| KRH10635 | Soybean | nucleus | 29.81 | 19.28 |
| KRH58800 | Soybean | nucleus | 28.57 | 18.85 |
| KRH42695 | Soybean | nucleus | 28.57 | 18.85 |
| KRH40560 | Soybean | nucleus | 18.01 | 18.71 |
| KRH42047 | Soybean | nucleus | 27.95 | 18.67 |
| KRH39494 | Soybean | nucleus | 25.47 | 18.55 |
| KRH74451 | Soybean | nucleus | 25.47 | 18.47 |
| KRH48304 | Soybean | nucleus | 27.33 | 17.96 |
| KRH31527 | Soybean | nucleus | 26.71 | 17.7 |
| KRH56775 | Soybean | nucleus | 26.71 | 17.7 |
| KRH03170 | Soybean | nucleus | 26.71 | 17.7 |
| KRH65193 | Soybean | nucleus | 26.71 | 17.55 |
| KRH01380 | Soybean | nucleus | 26.71 | 16.86 |
| KRH70973 | Soybean | nucleus | 25.47 | 16.8 |
| KRH00622 | Soybean | nucleus | 24.84 | 16.74 |
| KRH45097 | Soybean | nucleus | 26.09 | 16.73 |
| KRH18339 | Soybean | nucleus | 25.47 | 16.47 |
| KRG93698 | Soybean | nucleus | 25.47 | 16.47 |
| KRH09173 | Soybean | nucleus | 23.6 | 16.1 |
| KRH07467 | Soybean | nucleus | 23.6 | 16.1 |
| KRH35403 | Soybean | nucleus | 22.98 | 15.95 |
| KRH75123 | Soybean | nucleus | 24.22 | 15.85 |
| KRG91419 | Soybean | nucleus | 22.36 | 15.65 |
| KRH63171 | Soybean | nucleus | 23.6 | 15.57 |
| KRH45412 | Soybean | nucleus | 22.36 | 15.25 |
| KRH70974 | Soybean | nucleus | 22.98 | 15.23 |
| KRH54740 | Soybean | nucleus | 22.36 | 14.75 |
| KRH45099 | Soybean | nucleus | 22.36 | 14.52 |
| KRH38649 | Soybean | nucleus | 21.74 | 14.34 |
| KRG93701 | Soybean | nucleus | 21.12 | 13.93 |
| KRH03173 | Soybean | nucleus | 20.5 | 13.81 |
| KRH01382 | Soybean | nucleus | 21.12 | 13.44 |
| KRH18331 | Soybean | nucleus | 19.88 | 13.11 |
| KRH56774 | Soybean | nucleus | 19.88 | 13.11 |
| KRH14461 | Soybean | nucleus | 7.45 | 11.54 |
| KRH66116 | Soybean | nucleus, plastid | 3.11 | 6.33 |
| KRH11093 | Soybean | nucleus | 0.0 | 0.0 |
| KRH75125 | Soybean | nucleus | 0.0 | 0.0 |
| KRH64836 | Soybean | nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.1 | UniProt:A0A0R0KCS8 | EMBL:ACUP02002775 | ncoils:Coil | EnsemblPlantsGene:GLYMA_04G2571002 | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR002487 |
| ProteinID:KRH64825.1 | ProteinID:KRH64826.1 | ProteinID:KRH64827.1 | ProteinID:KRH64828.1 | ProteinID:KRH64829.1 | EnsemblPlants:KRH64830 |
| ProteinID:KRH64830 | ProteinID:KRH64830.1 | PFAM:PF01486 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF187 |
| InterPro:TF_Kbox | UniParc:UPI0006ED9412 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:52336390..52338728
Molecular Weight (calculated)
18666.4 Da
IEP (calculated)
9.091
GRAVY (calculated)
-0.681
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: IRSTIERYKK ACSDHSSAST TTEINAQYYQ QESAKLRQQI QMLQNSNRHL MGDALSTLTV KELKQLENRL ERGLTRIRSK KHEMLLAEIE YFQKREIELE
101: NENLCLRTKI TDVERIQQVN MVSGPELNVI QALASRNFFN PNMLDGGTVY PQTDKKILHL G
101: NENLCLRTKI TDVERIQQVN MVSGPELNVI QALASRNFFN PNMLDGGTVY PQTDKKILHL G
001: MGRGKIEIKR IENSTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFST RGRLYEYANN NIRSTIERYK KACSDSTNTS TVQEINAAYY QQESAKLRQQ
101: IQTIQNSNRN LMGDSLSSLS VKELKQVENR LEKAISRIRS KKHELLLVEI ENAQKREIEL DNENIYLRTK VAEVERYQQH HHQMVSGSEI NAIEALASRN
201: YFAHSIMTAG SGSGNGGSYS DPDKKILHLG
101: IQTIQNSNRN LMGDSLSSLS VKELKQVENR LEKAISRIRS KKHELLLVEI ENAQKREIEL DNENIYLRTK VAEVERYQQH HHQMVSGSEI NAIEALASRN
201: YFAHSIMTAG SGSGNGGSYS DPDKKILHLG
Arabidopsis Description
STKK-box region and MADS-box transcription factor family protein [Source:TAIR;Acc:AT4G09960]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.