Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58800 | Soybean | nucleus | 99.18 | 99.18 |
| KRG97386 | Soybean | nucleus | 55.33 | 93.75 |
| KRH31527 | Soybean | nucleus | 86.89 | 87.24 |
| VIT_01s0010g03900.t01 | Wine grape | nucleus | 76.64 | 84.62 |
| Solyc05g015750.2.1 | Tomato | nucleus | 80.74 | 81.74 |
| PGSC0003DMT400056363 | Potato | nucleus | 80.33 | 81.33 |
| KRH75125 | Soybean | nucleus | 19.26 | 77.05 |
| KRH64836 | Soybean | nucleus | 18.85 | 76.67 |
| AT1G24260.2 | Thale cress | nucleus | 78.28 | 76.1 |
| Bra030032.1-P | Field mustard | nucleus | 77.05 | 74.6 |
| CDY11824 | Canola | nucleus | 74.59 | 74.29 |
| Bra010955.1-P | Field mustard | nucleus | 74.18 | 74.18 |
| CDY66153 | Canola | nucleus | 74.18 | 73.88 |
| CDY27603 | Canola | nucleus | 76.23 | 73.52 |
| CDY15724 | Canola | nucleus | 75.82 | 73.41 |
| CDX84935 | Canola | nucleus | 75.41 | 73.31 |
| GSMUA_Achr9P01370_001 | Banana | nucleus | 72.95 | 73.25 |
| Bra032814.1-P | Field mustard | nucleus | 75.82 | 73.12 |
| CDY03905 | Canola | nucleus | 76.64 | 69.26 |
| KRH45097 | Soybean | nucleus | 66.39 | 64.54 |
| KRG93698 | Soybean | nucleus | 65.57 | 64.26 |
| KRH18339 | Soybean | nucleus | 65.57 | 64.26 |
| KRH01380 | Soybean | nucleus | 65.98 | 63.14 |
| KRH11093 | Soybean | nucleus | 18.85 | 61.33 |
| KRH03170 | Soybean | nucleus | 57.79 | 58.02 |
| KRH56775 | Soybean | nucleus | 57.38 | 57.61 |
| KRH40560 | Soybean | nucleus | 36.48 | 57.42 |
| KRH70973 | Soybean | nucleus | 56.97 | 56.97 |
| KRH75123 | Soybean | nucleus | 56.56 | 56.1 |
| KRH14461 | Soybean | nucleus | 21.72 | 50.96 |
| KRH48304 | Soybean | nucleus | 49.18 | 48.98 |
| KRH65193 | Soybean | nucleus | 48.77 | 48.57 |
| KRH00622 | Soybean | nucleus | 45.9 | 46.86 |
| KRH07467 | Soybean | nucleus | 42.62 | 44.07 |
| KRH09173 | Soybean | nucleus | 42.21 | 43.64 |
| KRH45412 | Soybean | nucleus | 41.8 | 43.22 |
| KRH03173 | Soybean | nucleus | 42.21 | 43.1 |
| KRH38649 | Soybean | nucleus | 41.8 | 41.8 |
| KRH54740 | Soybean | nucleus | 41.8 | 41.8 |
| KRH56774 | Soybean | nucleus | 41.8 | 41.8 |
| KRG91419 | Soybean | nucleus | 39.34 | 41.74 |
| KRH56460 | Soybean | nucleus | 37.7 | 41.44 |
| KRH63171 | Soybean | nucleus | 41.39 | 41.39 |
| KRH35403 | Soybean | nucleus | 38.93 | 40.95 |
| KRH70974 | Soybean | nucleus | 40.57 | 40.74 |
| KRH45099 | Soybean | nucleus | 41.39 | 40.73 |
| KRH01382 | Soybean | nucleus | 40.98 | 39.53 |
| KRG98899 | Soybean | nucleus | 38.93 | 38.62 |
| KRH46066 | Soybean | nucleus | 38.93 | 38.46 |
| KRG93701 | Soybean | nucleus | 37.7 | 37.7 |
| KRH18331 | Soybean | nucleus | 37.3 | 37.3 |
| KRH21150 | Soybean | nucleus | 36.89 | 37.04 |
| KRH73684 | Soybean | nucleus | 37.3 | 36.99 |
| KRH42930 | Soybean | nucleus | 36.48 | 36.63 |
| KRH16883 | Soybean | nucleus | 35.66 | 36.4 |
| KRH59043 | Soybean | nucleus | 35.66 | 35.8 |
| KRH72490 | Soybean | nucleus | 35.25 | 35.39 |
| KRH39494 | Soybean | nucleus | 31.56 | 34.84 |
| KRH74451 | Soybean | nucleus | 31.56 | 34.68 |
| KRH42051 | Soybean | nucleus | 31.15 | 34.39 |
| KRH10635 | Soybean | nucleus | 34.84 | 34.14 |
| KRH42047 | Soybean | nucleus | 31.97 | 32.37 |
| KRH64830 | Soybean | nucleus | 18.85 | 28.57 |
| KRH11095 | Soybean | nucleus | 19.26 | 28.14 |
| KRH21716 | Soybean | nucleus | 17.21 | 21.99 |
| KRH66116 | Soybean | nucleus, plastid | 4.51 | 13.92 |
Protein Annotations
| EntrezGene:100778931 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | EMBL:ACUP02004822 | ncoils:Coil | EnsemblPlantsGene:GLYMA_08G105500 |
| GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 | UniProt:K7L5X4 |
| EnsemblPlants:KRH42695 | ProteinID:KRH42695 | ProteinID:KRH42695.1 | InterPro:MADS_MEF2-like | PFAM:PF00319 | PFAM:PF01486 |
| PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF351 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00029483F7 |
Description
hypothetical protein
Coordinates
chr8:-:8127696..8134786
Molecular Weight (calculated)
27903.5 Da
IEP (calculated)
8.831
GRAVY (calculated)
-0.644
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS SSMLKTLERY QKCNYGAPEA NVSTREALVM ELSSQQEYLK
101: LKARYESLQR SQRNLMGEDL GPLSSKELES LERQLDSSLK QIRSTRTQFM LDQLSDLQRK EHLLSEANRS LRQRQLEGYQ INPLQLNPGV EEMGYGRNPA
201: QTHGEALFQQ MECEPTLQIG YQPDPVSVVT AGPSMSNYMA GWLP
101: LKARYESLQR SQRNLMGEDL GPLSSKELES LERQLDSSLK QIRSTRTQFM LDQLSDLQRK EHLLSEANRS LRQRQLEGYQ INPLQLNPGV EEMGYGRNPA
201: QTHGEALFQQ MECEPTLQIG YQPDPVSVVT AGPSMSNYMA GWLP
001: MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS SSMLRTLERY QKCNYGAPEP NVPSREALAV ELSSQQEYLK
101: LKERYDALQR TQRNLLGEDL GPLSTKELES LERQLDSSLK QIRALRTQFM LDQLNDLQSK ERMLTETNKT LRLRLADGYQ MPLQLNPNQE EVDHYGRHHH
201: QQQQHSQAFF QPLECEPILQ IGYQGQQDGM GAGPSVNNYM LGWLPYDTNS I
101: LKERYDALQR TQRNLLGEDL GPLSTKELES LERQLDSSLK QIRALRTQFM LDQLNDLQSK ERMLTETNKT LRLRLADGYQ MPLQLNPNQE EVDHYGRHHH
201: QQQQHSQAFF QPLECEPILQ IGYQGQQDGM GAGPSVNNYM LGWLPYDTNS I
Arabidopsis Description
SEP3At1g24260 [Source:UniProtKB/TrEMBL;Acc:B4F7R9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.