Factsheet for GSMUA_Achr9P01370_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97386	Soybean	nucleus	50.62	85.42
GSMUA_Achr9P29310_001	Banana	nucleus	57.2	84.76
VIT_01s0010g03900.t01	Wine grape	nucleus	75.31	82.81
Solyc05g015750.2.1	Tomato	nucleus	75.72	76.35
PGSC0003DMT400056363	Potato	nucleus	75.72	76.35
KRH58800	Soybean	nucleus	74.07	73.77
KRH42695	Soybean	nucleus	73.25	72.95
GSMUA_Achr11P...	Banana	nucleus	69.55	71.91
KRH31527	Soybean	nucleus	71.6	71.6
GSMUA_Achr6P06040_001	Banana	nucleus	69.14	71.19
AT1G24260.2	Thale cress	nucleus	72.02	69.72
CDY11824	Canola	nucleus	68.72	68.16
Bra010955.1-P	Field mustard	nucleus	68.31	68.03
CDY27603	Canola	nucleus	70.78	67.98
Bra032814.1-P	Field mustard	nucleus	70.78	67.98
Bra030032.1-P	Field mustard	nucleus	70.37	67.86
CDY15724	Canola	nucleus	70.37	67.86
CDY66153	Canola	nucleus	68.31	67.76
CDX84935	Canola	nucleus	69.96	67.73
CDY03905	Canola	nucleus	69.96	62.96
GSMUA_Achr8P28100_001	Banana	nucleus	56.79	57.5
GSMUA_Achr7P26700_001	Banana	nucleus	54.32	55.46
GSMUA_Achr3P15930_001	Banana	nucleus	54.73	55.42
GSMUA_Achr1P00750_001	Banana	nucleus	55.14	55.37
GSMUA_Achr2P06250_001	Banana	nucleus	51.44	55.31
GSMUA_Achr2P04350_001	Banana	nucleus	53.5	54.17
GSMUA_Achr4P14460_001	Banana	nucleus	53.5	54.17
GSMUA_Achr4P30120_001	Banana	nucleus	51.44	53.19
GSMUA_Achr2P10250_001	Banana	nucleus	51.85	52.07
GSMUA_Achr1P24060_001	Banana	nucleus	52.26	52.05
GSMUA_Achr2P13650_001	Banana	nucleus	48.15	47.56
GSMUA_Achr4P23540_001	Banana	nucleus	47.33	46.37
GSMUA_Achr6P00050_001	Banana	nucleus	46.09	46.28
GSMUA_Achr3P02280_001	Banana	nucleus	48.97	45.25
GSMUA_Achr5P06590_001	Banana	nucleus	32.1	44.57
GSMUA_Achr7P00460_001	Banana	nucleus	45.27	44.0
GSMUA_Achr3P30440_001	Banana	nucleus	41.15	43.48
GSMUA_Achr8P04330_001	Banana	nucleus	43.62	43.27
GSMUA_Achr10P...	Banana	nucleus	50.21	42.81
GSMUA_Achr10P...	Banana	nucleus	20.58	42.37
GSMUA_Achr10P...	Banana	nucleus	37.45	39.74
GSMUA_Achr10P...	Banana	nucleus	37.86	39.32
GSMUA_Achr3P25280_001	Banana	nucleus	42.8	39.1
GSMUA_Achr7P23690_001	Banana	nucleus	38.27	38.91
GSMUA_Achr6P14760_001	Banana	nucleus	35.8	34.25
GSMUA_Achr3P07310_001	Banana	nucleus	33.33	33.2
GSMUA_Achr7P12610_001	Banana	nucleus	32.1	33.19
GSMUA_Achr5P16870_001	Banana	nucleus, plastid	37.86	32.39
GSMUA_Achr9P15540_001	Banana	nucleus	32.51	32.24
GSMUA_Achr3P20280_001	Banana	nucleus	31.28	32.2
GSMUA_Achr5P24560_001	Banana	nucleus	30.86	31.78
GSMUA_Achr10P...	Banana	nucleus	37.45	28.53

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	ncoils:Coil	GO:GO:0000003	GO:GO:0000977	GO:GO:0001708
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653
GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0010093	GO:GO:0030154	GO:GO:0045944
GO:GO:0046983	GO:GO:0048481	GO:GO:0048833	EnsemblPlantsGene:GSMUA_Achr9G01370_001	EnsemblPlants:GSMUA_Achr9P01370_001	EnsemblPlants:GSMUA_Achr9T01370_001
InterPro:IPR002100	InterPro:IPR002487	InterPro:IPR036879	UniProt:M0TWJ4	InterPro:MADS_MEF2-like	PFAM:PF00319
PFAM:PF01486	PRINTS:PR00404	ScanProsite:PS00350	PFscan:PS50066	PFscan:PS51297	PANTHER:PTHR11945
PANTHER:PTHR11945:SF351	SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_Kbox	InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf
UniParc:UPI000294CA94	SEG:seg	:	:	:	:

Description

Agamous-like MADS-box protein AGL9 homolog [Source:GMGC_GENE;Acc:GSMUA_Achr9G01370_001]

Coordinates

chr9:-:1040429..1049307

Molecular Weight (calculated)

27689.3 Da

IEP (calculated)

8.654

GRAVY (calculated)

-0.593

Length

243 amino acids

Sequence
(BLAST)

001: MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIVFSN RGKLYEFCSS SSMLKTLERY QKCNYGAPET NIISREIQTS QQEYLKLKAR
101: VEALQRSQRN LLGEDLGPLS IKELEQLERQ LDASLRQIRS TRTQCMLDQL ADLQRREQML CEANKALKIR MDEGNQANQQ QLWDPNAQAV AYCRHQPQPQ
201: GDGFFQPIEC EPTLQIGYHP DQMAIAAAAP GPSVSSYVPG WLA

Best Arabidopsis Sequence Match ( AT1G24260.1 )
(BLAST)

001: MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS SSMLRTLERY QKCNYGAPEP NVPSREALAE LSSQQEYLKL
101: KERYDALQRT QRNLLGEDLG PLSTKELESL ERQLDSSLKQ IRALRTQFML DQLNDLQSKE RMLTETNKTL RLRLADGYQM PLQLNPNQEE VDHYGRHHHQ
201: QQQHSQAFFQ PLECEPILQI GYQGQQDGMG AGPSVNNYML GWLPYDTNSI

Arabidopsis Description

SEP3At1g24260 [Source:UniProtKB/TrEMBL;Acc:B4F7R9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.