Skip to main content
crop-pal logo
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 2
  • nucleus 5
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr3P20280_001 Banana nucleus 81.36 40.68
GSMUA_Achr7P12610_001 Banana nucleus 73.73 37.02
GSMUA_Achr3P07310_001 Banana nucleus 76.27 36.89
GSMUA_Achr5P06590_001 Banana nucleus 53.39 36.0
GSMUA_Achr9P15540_001 Banana nucleus 74.58 35.92
GSMUA_Achr5P24560_001 Banana nucleus 70.34 35.17
KRH42047 Soybean nucleus 62.71 30.71
GSMUA_Achr10P... Banana nucleus 53.39 27.51
GSMUA_Achr10P... Banana nucleus 50.85 25.64
GSMUA_Achr7P23690_001 Banana nucleus 50.85 25.1
GSMUA_Achr6P14760_001 Banana nucleus 50.85 23.62
GSMUA_Achr5P16870_001 Banana nucleus, plastid 52.54 21.83
GSMUA_Achr11P... Banana nucleus 43.22 21.7
GSMUA_Achr2P06250_001 Banana nucleus 40.68 21.24
GSMUA_Achr4P30120_001 Banana nucleus 41.53 20.85
GSMUA_Achr3P15930_001 Banana nucleus 42.37 20.83
GSMUA_Achr7P26700_001 Banana nucleus 41.53 20.59
GSMUA_Achr9P01370_001 Banana nucleus 42.37 20.58
GSMUA_Achr2P04350_001 Banana nucleus 41.53 20.42
GSMUA_Achr8P04330_001 Banana nucleus 42.37 20.41
GSMUA_Achr1P00750_001 Banana nucleus 41.53 20.25
GSMUA_Achr1P24060_001 Banana nucleus 41.53 20.08
GSMUA_Achr3P30440_001 Banana nucleus 38.98 20.0
GSMUA_Achr8P28100_001 Banana nucleus 40.68 20.0
GSMUA_Achr2P10250_001 Banana nucleus 40.68 19.83
GSMUA_Achr4P14460_001 Banana nucleus 38.98 19.17
GSMUA_Achr10P... Banana nucleus 51.69 19.12
GSMUA_Achr2P13650_001 Banana nucleus 38.98 18.7
GSMUA_Achr6P00050_001 Banana nucleus 38.14 18.59
GSMUA_Achr7P00460_001 Banana nucleus 38.98 18.4
GSMUA_Achr4P23540_001 Banana nucleus 38.14 18.15
GSMUA_Achr3P25280_001 Banana nucleus 39.83 17.67
GSMUA_Achr3P02280_001 Banana nucleus 38.98 17.49
GSMUA_Achr10P... Banana nucleus 40.68 16.84
GSMUA_Achr6P06040_001 Banana nucleus 17.8 8.9
GSMUA_Achr9P29310_001 Banana nucleus 5.08 3.66
Protein Annotations
MapMan:15.5.14Gene3D:3.40.1810.10ncoils:CoilGO:GO:0000977GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0045944GO:GO:0046983EnsemblPlantsGene:GSMUA_Achr10G30040_001EnsemblPlants:GSMUA_Achr10P30040_001
EnsemblPlants:GSMUA_Achr10T30040_001InterPro:IPR002100InterPro:IPR036879UniProt:M0RMM8InterPro:MADS_MEF2-likePFAM:PF00319
PRINTS:PR00404ScanProsite:PS00350PFscan:PS50066PANTHER:PTHR11945PANTHER:PTHR11945:SF263SMART:SM00432
SUPFAM:SSF55455InterPro:TF_MADSboxInterPro:TF_MADSbox_sfUniParc:UPI000294B9AB::
Description
MADS-box transcription factor 27 [Source:GMGC_GENE;Acc:GSMUA_Achr10G30040_001]
Coordinates
chr10:-:32325464..32332815
Molecular Weight (calculated)
13641.5 Da
IEP (calculated)
10.463
GRAVY (calculated)
-0.478
Length
118 amino acids
Sequence
(BLAST)
001: MVRGKIVIQR IDNSTSRQVT FSKRRNGLMK KAKELAILCD AEVGLVVFSS TGRLYDYAST SMKSVIERYK KANEEHQLVL NATSEVKFWQ MEVASLRQQL
101: HNLQENHRYA HFALHTSK
Best Arabidopsis Sequence Match ( AT3G57230.2 )
(BLAST)
001: MGRGKIAIKR INNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGVIIFSS TGRLYDFSSS SMKSVIERYS DAKGETSSEN DPASEIQFWQ KEAAILKRQL
101: HNLQENHRQM MGEELSGLSV EALQNLENQL ELSLRGVRMK KVLML
Arabidopsis Description
AGL16Agamous-like MADS-box protein AGL16 [Source:UniProtKB/Swiss-Prot;Acc:A2RVQ5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.