Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- plasma membrane 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P11900_001 | Banana | nucleus | 72.73 | 5.48 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 90.91 | 4.1 |
| GSMUA_Achr8P07230_001 | Banana | nucleus | 81.82 | 3.81 |
| GSMUA_Achr5P26530_001 | Banana | mitochondrion, nucleus, plastid | 72.73 | 3.56 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 54.55 | 2.44 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 45.45 | 1.44 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP05480_001 | EnsemblPlants:GSMUA_AchrUn_randomT05480_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG05480_001 | UniParc:UPI000295919F | UniProt:M0U6L0 | MapMan:35.2 |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG05480_001]
Coordinates
chrchrUn_random:+:21389812..21389847
Molecular Weight (calculated)
1371.8 Da
IEP (calculated)
11.751
GRAVY (calculated)
-0.836
Length
11 amino acids
Sequence
(BLAST)
(BLAST)
1: MGRRKIEIKK I
001: MGRRKIEIKR IENKSSRQVT FSKRRNGLID KARQLSILCE SSVAVVVVSA SGKLYDSSSG DDISKIIDRY EIQHADELRA LDLEEKIQNY LPHKELLETV
101: QSKLEEPNVD NVSVDSLISL EEQLETALSV SRARKAELMM EYIESLKEKE KLLREENQVL ASQVTMTTIS SALEAN
101: QSKLEEPNVD NVSVDSLISL EEQLETALSV SRARKAELMM EYIESLKEKE KLLREENQVL ASQVTMTTIS SALEAN
Arabidopsis Description
MAF1K-box region and MADS-box transcription factor family protein [Source:TAIR;Acc:AT1G77080]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.