Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- nucleus 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36151 | Canola | nucleus | 28.03 | 84.09 |
| Bra007829.1-P | Field mustard | nucleus | 57.58 | 73.43 |
| Bra032057.1-P | Field mustard | nucleus | 49.62 | 72.78 |
| CDY34751 | Canola | cytosol | 27.65 | 64.6 |
| CDX76788 | Canola | cytosol | 26.89 | 62.83 |
| CDY45604 | Canola | cytosol | 12.88 | 58.62 |
| CDY36150 | Canola | cytosol | 12.5 | 56.9 |
| PGSC0003DMT400094062 | Potato | nucleus | 33.33 | 43.14 |
| PGSC0003DMT400094816 | Potato | golgi, nucleus, plastid | 35.98 | 42.99 |
| VIT_03s0088g00590.t01 | Wine grape | nucleus | 34.09 | 42.06 |
| KRG91150 | Soybean | nucleus | 35.98 | 42.04 |
| KRH35626 | Soybean | nucleus | 34.85 | 40.71 |
| VIT_03s0088g00610.t01 | Wine grape | cytosol | 30.3 | 36.53 |
| AT2G34440.1 | Thale cress | nucleus | 23.11 | 35.47 |
| AT1G65360.1 | Thale cress | nucleus | 26.52 | 30.97 |
| AT3G66656.1 | Thale cress | nucleus | 20.83 | 30.9 |
| Solyc04g025970.1.1 | Tomato | cytosol, nucleus, peroxisome | 13.26 | 29.91 |
| AT5G60440.1 | Thale cress | nucleus | 32.95 | 29.1 |
| AT1G01530.1 | Thale cress | nucleus | 26.52 | 28.34 |
| AT4G36590.1 | Thale cress | nucleus | 26.14 | 27.82 |
| AT1G29962.1 | Thale cress | nucleus | 18.94 | 27.03 |
| AT1G28460.1 | Thale cress | nucleus | 18.56 | 26.92 |
| AT1G72350.1 | Thale cress | nucleus | 22.73 | 26.79 |
| AT1G17310.2 | Thale cress | nucleus | 21.97 | 25.44 |
| AT1G28450.1 | Thale cress | nucleus | 17.42 | 24.86 |
| AT1G54760.1 | Thale cress | nucleus | 14.02 | 22.98 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 21.21 | 22.95 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 21.21 | 22.76 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 20.08 | 15.27 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:817021 | ProteinID:AAD23028.1 | ProteinID:AEC07635.1 | Symbol:AGL61 |
| ArrayExpress:AT2G24840 | EnsemblPlantsGene:AT2G24840 | RefSeq:AT2G24840 | TAIR:AT2G24840 | RefSeq:AT2G24840-TAIR-G | EnsemblPlants:AT2G24840.1 |
| TAIR:AT2G24840.1 | Unigene:At.52900 | EMBL:DQ056542 | EMBL:EU836691 | GO:GO:0000977 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009559 | GO:GO:0009987 |
| GO:GO:0030154 | GO:GO:0043078 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 |
| InterPro:MADS_MEF2-like | RefSeq:NP_850058.1 | PFAM:PF00319 | PO:PO:0009089 | PO:PO:0020090 | PRINTS:PR00404 |
| PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF185 | UniProt:Q4PSU4 | SMART:SM00432 | SUPFAM:SSF55455 |
| InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000016237D | SEG:seg | : | : |
Description
AGL61Agamous-like MADS-box protein AGL61 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSU4]
Coordinates
chr2:+:10581069..10582015
Molecular Weight (calculated)
30266.0 Da
IEP (calculated)
10.156
GRAVY (calculated)
-0.514
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MYVTKYKNKL PTLQVDLIIM PHQTQACIYK QTLSLHQIFQ QRKATKTLHT KKTMMSKKKE SIGRQKIPMV KIKKESHRQV TFSKRRAGLF KKASELCTLC
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.