Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021910.1-P | Field mustard | nucleus | 76.74 | 72.53 |
| AT3G66656.1 | Thale cress | nucleus | 55.81 | 53.93 |
| KRG99424 | Soybean | nucleus | 37.21 | 35.16 |
| KRH41505 | Soybean | cytosol, nucleus, plastid | 32.56 | 34.78 |
| KRH60216 | Soybean | nucleus | 37.21 | 34.59 |
| PGSC0003DMT400090264 | Potato | mitochondrion | 29.65 | 33.55 |
| KRH45604 | Soybean | nucleus | 36.05 | 32.8 |
| KRH41503 | Soybean | nucleus | 30.23 | 32.5 |
| KRH60217 | Soybean | nucleus | 32.56 | 31.64 |
| PGSC0003DMT400097162 | Potato | nucleus | 29.07 | 30.3 |
| PGSC0003DMT400088636 | Potato | mitochondrion | 20.35 | 29.91 |
| Solyc01g060310.1.1 | Tomato | nucleus, plastid | 22.67 | 28.06 |
| VIT_00s0386g00010.t01 | Wine grape | nucleus | 32.56 | 27.59 |
| PGSC0003DMT400097714 | Potato | mitochondrion | 23.84 | 27.33 |
| PGSC0003DMT400086619 | Potato | nucleus | 27.91 | 25.81 |
| PGSC0003DMT400097135 | Potato | mitochondrion | 27.91 | 25.4 |
| PGSC0003DMT400016092 | Potato | mitochondrion | 29.07 | 25.38 |
| PGSC0003DMT400094407 | Potato | mitochondrion | 28.49 | 23.22 |
| AT2G24840.1 | Thale cress | nucleus | 35.47 | 23.11 |
| PGSC0003DMT400092385 | Potato | mitochondrion | 26.16 | 22.84 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 31.98 | 22.54 |
| PGSC0003DMT400094024 | Potato | golgi, mitochondrion | 23.84 | 22.4 |
| AT1G65360.1 | Thale cress | nucleus | 29.07 | 22.12 |
| AT1G01530.1 | Thale cress | nucleus | 31.4 | 21.86 |
| AT4G36590.1 | Thale cress | nucleus | 30.23 | 20.97 |
| AT1G28460.1 | Thale cress | nucleus | 22.09 | 20.88 |
| AT5G60440.1 | Thale cress | nucleus | 36.05 | 20.74 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 29.65 | 20.73 |
| AT1G29962.1 | Thale cress | nucleus | 22.09 | 20.54 |
| Solyc01g060300.1.1 | Tomato | nucleus | 23.26 | 18.96 |
| AT1G72350.1 | Thale cress | nucleus | 22.67 | 17.41 |
| AT1G28450.1 | Thale cress | nucleus | 18.6 | 17.3 |
| AT1G17310.2 | Thale cress | nucleus | 20.93 | 15.79 |
| AT1G54760.1 | Thale cress | nucleus | 14.53 | 15.53 |
| PGSC0003DMT400086182 | Potato | cytosol | 11.05 | 14.84 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 27.91 | 13.83 |
| PGSC0003DMT400092220 | Potato | cytosol | 9.88 | 13.28 |
| PGSC0003DMT400090145 | Potato | nucleus | 10.47 | 11.92 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:818007 | UniProt:A0A178VU29 | ProteinID:AAC26702.1 | ProteinID:AAM14943.1 |
| EMBL:AB094117 | ProteinID:AEC08974.1 | Symbol:AGL29 | ArrayExpress:AT2G34440 | EnsemblPlantsGene:AT2G34440 | RefSeq:AT2G34440 |
| TAIR:AT2G34440 | RefSeq:AT2G34440-TAIR-G | EnsemblPlants:AT2G34440.1 | TAIR:AT2G34440.1 | ncoils:Coil | EMBL:DQ446598 |
| EMBL:DQ653040 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | RefSeq:NP_180991.1 | UniProt:O64703 | ProteinID:OAP08901.1 |
| PFAM:PF00319 | PO:PO:0000293 | PO:PO:0000423 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0005660 |
| PO:PO:0007616 | PO:PO:0009046 | PO:PO:0009089 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00404 |
| PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF185 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox |
| InterPro:TF_MADSbox_sf | UniParc:UPI00000A0388 | SEG:seg | : | : | : |
Description
AGL29AGL29 [Source:UniProtKB/TrEMBL;Acc:A0A178VU29]
Coordinates
chr2:+:14526671..14527734
Molecular Weight (calculated)
19754.5 Da
IEP (calculated)
7.417
GRAVY (calculated)
-0.916
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRKIKMEM VQDMNTRQVT FSKRRTGLFK KASELATLCN AELGIVVFSP GGKPFSYGKP NLDSVAERFM REYDDSDSGD EEKSGNYRPK LKRLSERLDL
101: LNQEVEAEKE RGEKSQEKLE SAGDERFKES IETLTLDELN EYKDRLQTVH GRIEGQVNHL QASSCLMLLS RK
101: LNQEVEAEKE RGEKSQEKLE SAGDERFKES IETLTLDELN EYKDRLQTVH GRIEGQVNHL QASSCLMLLS RK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.