Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400094407 | Potato | mitochondrion | 94.7 | 67.77 |
| PGSC0003DMT400086182 | Potato | cytosol | 55.63 | 65.62 |
| PGSC0003DMT400092220 | Potato | cytosol | 50.99 | 60.16 |
| PGSC0003DMT400094024 | Potato | golgi, mitochondrion | 60.26 | 49.73 |
| PGSC0003DMT400016092 | Potato | mitochondrion | 58.94 | 45.18 |
| PGSC0003DMT400092385 | Potato | mitochondrion | 55.63 | 42.64 |
| PGSC0003DMT400086619 | Potato | nucleus | 52.32 | 42.47 |
| PGSC0003DMT400097135 | Potato | mitochondrion | 49.01 | 39.15 |
| PGSC0003DMT400097162 | Potato | nucleus | 40.4 | 36.97 |
| PGSC0003DMT400088636 | Potato | mitochondrion | 28.48 | 36.75 |
| PGSC0003DMT400090264 | Potato | mitochondrion | 36.42 | 36.18 |
| PGSC0003DMT400097714 | Potato | mitochondrion | 32.45 | 32.67 |
| PGSC0003DMT400095852 | Potato | cytosol | 21.19 | 21.77 |
| PGSC0003DMT400086589 | Potato | mitochondrion | 22.52 | 20.48 |
| PGSC0003DMT400091464 | Potato | mitochondrion | 21.85 | 18.75 |
| PGSC0003DMT400094942 | Potato | nucleus | 15.89 | 18.32 |
| PGSC0003DMT400085261 | Potato | nucleus | 19.87 | 18.29 |
| PGSC0003DMT400090556 | Potato | mitochondrion, nucleus, plastid | 19.21 | 17.37 |
| PGSC0003DMT400085650 | Potato | mitochondrion | 19.21 | 17.26 |
| PGSC0003DMT400095668 | Potato | mitochondrion | 12.58 | 15.57 |
| PGSC0003DMT400094062 | Potato | nucleus | 19.87 | 14.71 |
| Solyc01g060310.1.1 | Tomato | nucleus, plastid | 13.24 | 14.39 |
| PGSC0003DMT400092448 | Potato | plastid | 21.19 | 14.22 |
| PGSC0003DMT400091054 | Potato | plastid | 10.6 | 14.04 |
| Solyc01g060300.1.1 | Tomato | nucleus | 18.54 | 13.27 |
| PGSC0003DMT400013136 | Potato | nucleus | 17.22 | 13.2 |
| PGSC0003DMT400094816 | Potato | golgi, nucleus, plastid | 19.21 | 13.12 |
| PGSC0003DMT400002920 | Potato | nucleus | 15.23 | 13.07 |
| Bra021910.1-P | Field mustard | nucleus | 15.23 | 12.64 |
| PGSC0003DMT400086349 | Potato | cytosol, mitochondrion | 8.61 | 12.62 |
| VIT_00s0386g00010.t01 | Wine grape | nucleus | 15.89 | 11.82 |
| PGSC0003DMT400088010 | Potato | cytosol | 12.58 | 11.8 |
| PGSC0003DMT400095917 | Potato | cytosol | 9.93 | 11.36 |
| AT3G66656.1 | Thale cress | nucleus | 13.24 | 11.24 |
| PGSC0003DMT400089582 | Potato | cytosol | 11.92 | 11.18 |
| PGSC0003DMT400094043 | Potato | cytosol | 10.6 | 10.74 |
| PGSC0003DMT400097360 | Potato | cytosol | 9.27 | 10.61 |
| PGSC0003DMT400000210 | Potato | nucleus | 9.93 | 10.49 |
| AT2G34440.1 | Thale cress | nucleus | 11.92 | 10.47 |
| PGSC0003DMT400093647 | Potato | nucleus | 9.93 | 10.42 |
| PGSC0003DMT400090103 | Potato | nucleus | 11.92 | 10.11 |
| PGSC0003DMT400088611 | Potato | nucleus | 10.6 | 9.7 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 15.23 | 9.35 |
| PGSC0003DMT400095980 | Potato | nucleus | 10.6 | 9.25 |
| PGSC0003DMT400063794 | Potato | plastid | 13.91 | 9.09 |
| KRH45604 | Soybean | nucleus | 11.26 | 8.99 |
| PGSC0003DMT400093319 | Potato | nucleus | 10.6 | 8.99 |
| Bra001209.1-P | Field mustard | nucleus | 10.6 | 8.94 |
| CDX74094 | Canola | nucleus | 10.6 | 8.94 |
| CDY57614 | Canola | nucleus | 10.6 | 8.94 |
| PGSC0003DMT400013105 | Potato | nucleus | 12.58 | 8.92 |
| PGSC0003DMT400089966 | Potato | cytosol | 9.93 | 8.82 |
| PGSC0003DMT400087813 | Potato | nucleus | 10.6 | 8.79 |
| KRH41505 | Soybean | cytosol, nucleus, plastid | 9.27 | 8.7 |
| PGSC0003DMT400090655 | Potato | cytosol | 9.93 | 8.62 |
| PGSC0003DMT400095957 | Potato | cytosol | 7.28 | 8.53 |
| PGSC0003DMT400091277 | Potato | nucleus | 9.93 | 8.33 |
| KRG99424 | Soybean | nucleus | 9.93 | 8.24 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 13.24 | 8.2 |
| PGSC0003DMT400088968 | Potato | nucleus | 5.96 | 8.18 |
| KRH60216 | Soybean | nucleus | 9.93 | 8.11 |
| KRH60217 | Soybean | nucleus | 9.27 | 7.91 |
| PGSC0003DMT400092871 | Potato | nucleus | 7.28 | 7.86 |
| PGSC0003DMT400097679 | Potato | cytosol | 6.62 | 7.81 |
| PGSC0003DMT400094886 | Potato | nucleus | 8.61 | 7.22 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 15.89 | 6.92 |
| PGSC0003DMT400095190 | Potato | nucleus | 7.95 | 6.67 |
| PGSC0003DMT400091428 | Potato | nucleus | 7.28 | 6.4 |
| KRH41503 | Soybean | nucleus | 6.62 | 6.25 |
| PGSC0003DMT400027289 | Potato | cytosol | 5.3 | 6.2 |
| PGSC0003DMT400093117 | Potato | nucleus | 6.62 | 5.56 |
| PGSC0003DMT400090024 | Potato | nucleus | 5.3 | 4.68 |
| PGSC0003DMT400086435 | Potato | nucleus | 0.66 | 0.95 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400090145 | EnsemblPlantsGene:PGSC0003DMG400039716 | ncoils:Coil | PGSC:PGSC0003DMG400039716 | SEG:seg | UniParc:UPI000295A88B |
| UniProt:M1DJR6 | MapMan:35.2 | : | : | : | : |
Description
Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400039716]
Coordinates
chr11:+:41771573..41772028
Molecular Weight (calculated)
16947.4 Da
IEP (calculated)
4.284
GRAVY (calculated)
-1.011
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MIQSNRKRNL DKFLGENPQP DTNASNPDTD APNPNTDAPN PIVVTHQNAY VDEINKKLNK LENSLEREKK YGEALQSLRN ELPYEKIDFL NLKKLSEALE
101: AADEEVERVA SQLREGDIEF PYQIIGSALA PLRVEENNSS EPDEGSSGSH E
101: AADEEVERVA SQLREGDIEF PYQIIGSALA PLRVEENNSS EPDEGSSGSH E
001: MCALVPPLYP NFGWPCGDHS FYETDDVSNT FLDFPLPDLT VTHENVSSEN NRTLLDNPVV MKKLNHNASE RERRKKINTM FSSLRSCLPP TNQTKKLSVS
101: ATVSQALKYI PELQEQVKKL MKKKEELSFQ ISGQRDLVYT DQNSKSEEGV TSYASTVSST RLSETEVMVQ ISSLQTEKCS FGNVLSGVEE DGLVLVGASS
201: SRSHGERLFY SMHLQIKNGQ VNSEELGDRL LYLYEKCGHS FT
101: ATVSQALKYI PELQEQVKKL MKKKEELSFQ ISGQRDLVYT DQNSKSEEGV TSYASTVSST RLSETEVMVQ ISSLQTEKCS FGNVLSGVEE DGLVLVGASS
201: SRSHGERLFY SMHLQIKNGQ VNSEELGDRL LYLYEKCGHS FT
Arabidopsis Description
BHLH100BHLH100 [Source:UniProtKB/TrEMBL;Acc:A0A178VX33]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.