Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g034260.1.1 | Tomato | nucleus | 75.14 | 70.65 |
| PGSC0003DMT400095190 | Potato | nucleus | 49.71 | 47.78 |
| PGSC0003DMT400093117 | Potato | nucleus | 47.98 | 46.11 |
| PGSC0003DMT400090655 | Potato | cytosol | 46.24 | 45.98 |
| PGSC0003DMT400091428 | Potato | nucleus | 45.66 | 45.93 |
| PGSC0003DMT400088968 | Potato | nucleus | 28.9 | 45.45 |
| PGSC0003DMT400093647 | Potato | nucleus | 37.57 | 45.14 |
| PGSC0003DMT400094886 | Potato | nucleus | 46.82 | 45.0 |
| PGSC0003DMT400093319 | Potato | nucleus | 45.66 | 44.38 |
| PGSC0003DMT400090103 | Potato | nucleus | 45.66 | 44.38 |
| PGSC0003DMT400091277 | Potato | nucleus | 45.66 | 43.89 |
| PGSC0003DMT400027289 | Potato | cytosol | 31.79 | 42.64 |
| PGSC0003DMT400095957 | Potato | cytosol | 31.21 | 41.86 |
| PGSC0003DMT400092871 | Potato | nucleus | 32.95 | 40.71 |
| PGSC0003DMT400097679 | Potato | cytosol | 30.06 | 40.62 |
| PGSC0003DMT400089582 | Potato | cytosol | 37.57 | 40.37 |
| PGSC0003DMT400088010 | Potato | cytosol | 36.99 | 39.75 |
| PGSC0003DMT400088611 | Potato | nucleus | 37.57 | 39.39 |
| PGSC0003DMT400089966 | Potato | cytosol | 36.99 | 37.65 |
| PGSC0003DMT400087813 | Potato | nucleus | 39.31 | 37.36 |
| PGSC0003DMT400094043 | Potato | cytosol | 30.06 | 34.9 |
| PGSC0003DMT400097360 | Potato | cytosol | 23.7 | 31.06 |
| PGSC0003DMT400086349 | Potato | cytosol, mitochondrion | 17.92 | 30.1 |
| PGSC0003DMT400091054 | Potato | plastid | 19.65 | 29.82 |
| PGSC0003DMT400094942 | Potato | nucleus | 22.54 | 29.77 |
| PGSC0003DMT400095917 | Potato | cytosol | 22.54 | 29.55 |
| PGSC0003DMT400086435 | Potato | nucleus | 17.92 | 29.52 |
| PGSC0003DMT400095668 | Potato | mitochondrion | 20.81 | 29.51 |
| PGSC0003DMT400086589 | Potato | mitochondrion | 26.59 | 27.71 |
| PGSC0003DMT400094062 | Potato | nucleus | 31.79 | 26.96 |
| PGSC0003DMT400090556 | Potato | mitochondrion, nucleus, plastid | 26.01 | 26.95 |
| PGSC0003DMT400097714 | Potato | mitochondrion | 23.12 | 26.67 |
| PGSC0003DMT400090264 | Potato | mitochondrion | 23.12 | 26.32 |
| PGSC0003DMT400094816 | Potato | golgi, nucleus, plastid | 33.53 | 26.24 |
| PGSC0003DMT400097162 | Potato | nucleus | 24.86 | 26.06 |
| PGSC0003DMT400088636 | Potato | mitochondrion | 17.34 | 25.64 |
| PGSC0003DMT400085650 | Potato | mitochondrion | 24.86 | 25.6 |
| PGSC0003DMT400091464 | Potato | mitochondrion | 26.01 | 25.57 |
| AT1G28450.1 | Thale cress | nucleus | 27.17 | 25.41 |
| AT1G28460.1 | Thale cress | nucleus | 26.59 | 25.27 |
| AT1G29962.1 | Thale cress | nucleus | 26.01 | 24.32 |
| PGSC0003DMT400013136 | Potato | nucleus | 26.59 | 23.35 |
| PGSC0003DMT400097135 | Potato | mitochondrion | 23.7 | 21.69 |
| PGSC0003DMT400094024 | Potato | golgi, mitochondrion | 22.54 | 21.31 |
| CDX99867 | Canola | nucleus | 23.7 | 21.13 |
| PGSC0003DMT400090024 | Potato | nucleus | 20.81 | 21.05 |
| CDY26304 | Canola | nucleus | 21.97 | 20.54 |
| AT1G54760.1 | Thale cress | nucleus | 19.08 | 20.5 |
| Bra032347.1-P | Field mustard | nucleus | 21.97 | 20.43 |
| PGSC0003DMT400086619 | Potato | nucleus | 21.97 | 20.43 |
| PGSC0003DMT400016092 | Potato | mitochondrion | 23.12 | 20.3 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 28.32 | 19.92 |
| PGSC0003DMT400063794 | Potato | plastid | 26.59 | 19.91 |
| PGSC0003DMT400095852 | Potato | cytosol | 16.76 | 19.73 |
| PGSC0003DMT400013105 | Potato | nucleus | 24.28 | 19.72 |
| PGSC0003DMT400085261 | Potato | nucleus | 18.5 | 19.51 |
| PGSC0003DMT400092385 | Potato | mitochondrion | 21.39 | 18.78 |
| PGSC0003DMT400002920 | Potato | nucleus | 19.08 | 18.75 |
| PGSC0003DMT400000210 | Potato | nucleus | 15.03 | 18.18 |
| PGSC0003DMT400094407 | Potato | mitochondrion | 21.39 | 17.54 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 23.7 | 16.8 |
| PGSC0003DMT400092448 | Potato | plastid | 18.5 | 14.22 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 23.7 | 11.82 |
| PGSC0003DMT400086182 | Potato | cytosol | 8.09 | 10.94 |
| PGSC0003DMT400092220 | Potato | cytosol | 8.09 | 10.94 |
| PGSC0003DMT400090145 | Potato | nucleus | 9.25 | 10.6 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | UniProt:M1DXG3 | PFAM:PF00319 |
| EnsemblPlantsGene:PGSC0003DMG400045551 | PGSC:PGSC0003DMG400045551 | EnsemblPlants:PGSC0003DMT400095980 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF185 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0002958E07 |
Description
Mads box protein [Source:PGSC_GENE;Acc:PGSC0003DMG400045551]
Coordinates
chr3:-:4972791..4973312
Molecular Weight (calculated)
20096.1 Da
IEP (calculated)
8.855
GRAVY (calculated)
-0.701
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MESKKTRGKQ KISMSKIEKQ RDRNVAFSKR CSTLYKMANE LVKLCGVDIE IVLFSPTNKP FSFFHPTTEA VIERFLSPNS QLSENTRLDA DQPRNKVNQL
101: NNHLVAMEKR LEHIEEIECA QTLIQLSQME ENGQRSKWKS IDQLNADEIT TFEASWLRTT VSTMNYPLEK LKN
101: NNHLVAMEKR LEHIEEIECA QTLIQLSQME ENGQRSKWKS IDQLNADEIT TFEASWLRTT VSTMNYPLEK LKN
001: MNPKKTKGKQ KINIKKIEKD EDRSVTLSKR LNAIYTMIIE LSILCGVEVA FIGYSCSGKP YTFGSPSFQA VVERFLNGEA SSSSSSSLQR SVKNAHKQAK
101: IQELCKRYNR LVEELKVDEV KVKKAAALAE TRAVNKDAWW KADPNDVKDH EKAKKMMEKY QELKEKLREE VALRIKRGHD ENNNK
101: IQELCKRYNR LVEELKVDEV KVKKAAALAE TRAVNKDAWW KADPNDVKDH EKAKKMMEKY QELKEKLREE VALRIKRGHD ENNNK
Arabidopsis Description
AGL58F3M18.11 [Source:UniProtKB/TrEMBL;Acc:Q9SGP3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.