Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400092220 | Potato | cytosol | 85.94 | 85.94 |
| PGSC0003DMT400086619 | Potato | nucleus | 85.16 | 58.6 |
| PGSC0003DMT400090145 | Potato | nucleus | 65.62 | 55.63 |
| PGSC0003DMT400097162 | Potato | nucleus | 67.19 | 52.12 |
| PGSC0003DMT400090264 | Potato | mitochondrion | 60.94 | 51.32 |
| PGSC0003DMT400016092 | Potato | mitochondrion | 65.62 | 42.64 |
| PGSC0003DMT400097714 | Potato | mitochondrion | 49.22 | 42.0 |
| PGSC0003DMT400092385 | Potato | mitochondrion | 62.5 | 40.61 |
| PGSC0003DMT400094024 | Potato | golgi, mitochondrion | 57.81 | 40.44 |
| PGSC0003DMT400094407 | Potato | mitochondrion | 66.41 | 40.28 |
| PGSC0003DMT400097135 | Potato | mitochondrion | 57.03 | 38.62 |
| PGSC0003DMT400095852 | Potato | cytosol | 28.12 | 24.49 |
| PGSC0003DMT400086589 | Potato | mitochondrion | 28.12 | 21.69 |
| PGSC0003DMT400094942 | Potato | nucleus | 21.09 | 20.61 |
| PGSC0003DMT400091464 | Potato | mitochondrion | 27.34 | 19.89 |
| PGSC0003DMT400085261 | Potato | nucleus | 25.0 | 19.51 |
| PGSC0003DMT400085650 | Potato | mitochondrion | 25.0 | 19.05 |
| PGSC0003DMT400090556 | Potato | mitochondrion, nucleus, plastid | 24.22 | 18.56 |
| PGSC0003DMT400092448 | Potato | plastid | 27.34 | 15.56 |
| PGSC0003DMT400088636 | Potato | mitochondrion | 14.06 | 15.38 |
| PGSC0003DMT400095668 | Potato | mitochondrion | 14.06 | 14.75 |
| PGSC0003DMT400013136 | Potato | nucleus | 21.88 | 14.21 |
| PGSC0003DMT400091054 | Potato | plastid | 12.5 | 14.04 |
| PGSC0003DMT400094062 | Potato | nucleus | 21.88 | 13.73 |
| AT3G66656.1 | Thale cress | nucleus | 17.97 | 12.92 |
| VIT_00s0386g00010.t01 | Wine grape | nucleus | 19.53 | 12.32 |
| Bra021910.1-P | Field mustard | nucleus | 17.19 | 12.09 |
| PGSC0003DMT400094816 | Potato | golgi, nucleus, plastid | 20.31 | 11.76 |
| PGSC0003DMT400088010 | Potato | cytosol | 14.06 | 11.18 |
| AT2G34440.1 | Thale cress | nucleus | 14.84 | 11.05 |
| Bra001209.1-P | Field mustard | nucleus | 14.84 | 10.61 |
| CDX74094 | Canola | nucleus | 14.84 | 10.61 |
| CDY57614 | Canola | nucleus | 14.84 | 10.61 |
| PGSC0003DMT400095917 | Potato | cytosol | 10.94 | 10.61 |
| PGSC0003DMT400089582 | Potato | cytosol | 13.28 | 10.56 |
| PGSC0003DMT400093647 | Potato | nucleus | 11.72 | 10.42 |
| PGSC0003DMT400002920 | Potato | nucleus | 14.06 | 10.23 |
| Solyc01g060310.1.1 | Tomato | nucleus, plastid | 10.94 | 10.07 |
| PGSC0003DMT400089966 | Potato | cytosol | 13.28 | 10.0 |
| PGSC0003DMT400097360 | Potato | cytosol | 10.16 | 9.85 |
| PGSC0003DMT400086349 | Potato | cytosol, mitochondrion | 7.81 | 9.71 |
| PGSC0003DMT400094043 | Potato | cytosol | 10.94 | 9.4 |
| PGSC0003DMT400095957 | Potato | cytosol | 9.38 | 9.3 |
| PGSC0003DMT400090655 | Potato | cytosol | 12.5 | 9.2 |
| Solyc01g060300.1.1 | Tomato | nucleus | 14.84 | 9.0 |
| PGSC0003DMT400090103 | Potato | nucleus | 12.5 | 8.99 |
| PGSC0003DMT400088611 | Potato | nucleus | 10.94 | 8.48 |
| PGSC0003DMT400000210 | Potato | nucleus | 9.38 | 8.39 |
| PGSC0003DMT400091277 | Potato | nucleus | 11.72 | 8.33 |
| PGSC0003DMT400095980 | Potato | nucleus | 10.94 | 8.09 |
| KRH60217 | Soybean | nucleus | 10.94 | 7.91 |
| PGSC0003DMT400093319 | Potato | nucleus | 10.94 | 7.87 |
| PGSC0003DMT400097679 | Potato | cytosol | 7.81 | 7.81 |
| PGSC0003DMT400094886 | Potato | nucleus | 10.94 | 7.78 |
| PGSC0003DMT400013105 | Potato | nucleus | 12.5 | 7.51 |
| KRH41505 | Soybean | cytosol, nucleus, plastid | 9.38 | 7.45 |
| KRG99424 | Soybean | nucleus | 10.16 | 7.14 |
| PGSC0003DMT400091428 | Potato | nucleus | 9.38 | 6.98 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 13.28 | 6.97 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 13.28 | 6.91 |
| PGSC0003DMT400087813 | Potato | nucleus | 9.38 | 6.59 |
| PGSC0003DMT400063794 | Potato | plastid | 11.72 | 6.49 |
| KRH60216 | Soybean | nucleus | 9.38 | 6.49 |
| PGSC0003DMT400088968 | Potato | nucleus | 5.47 | 6.36 |
| KRH45604 | Soybean | nucleus | 9.38 | 6.35 |
| PGSC0003DMT400027289 | Potato | cytosol | 6.25 | 6.2 |
| PGSC0003DMT400093117 | Potato | nucleus | 8.59 | 6.11 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 15.62 | 5.76 |
| PGSC0003DMT400095190 | Potato | nucleus | 7.81 | 5.56 |
| PGSC0003DMT400092871 | Potato | nucleus | 5.47 | 5.0 |
| PGSC0003DMT400090024 | Potato | nucleus | 6.25 | 4.68 |
| KRH41503 | Soybean | nucleus | 4.69 | 3.75 |
| PGSC0003DMT400086435 | Potato | nucleus | 0.78 | 0.95 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400086182 | EnsemblPlantsGene:PGSC0003DMG400035753 | ncoils:Coil | PGSC:PGSC0003DMG400035753 | SEG:seg | UniParc:UPI00029579D7 |
| UniProt:M1DB64 | MapMan:35.2 | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400035753]
Coordinates
chr00:+:29276791..29277177
Molecular Weight (calculated)
14348.7 Da
IEP (calculated)
4.735
GRAVY (calculated)
-0.823
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRFLGENPP TDTDAPNPIV IAHQNANTDE INRKLNRLEI SLEREKKHGE ALQASRKELP IEKLSSFDLK NMCKALEAAN EEIERVVSIK KERGFEFPYQ
101: TIGSAFAPLR VTEYSSSDSD EGPSGSNE
101: TIGSAFAPLR VTEYSSSDSD EGPSGSNE
001: MPDDDKELQE PKEEDSYVWD SDTQLYIHHS SGFYHDPNAG WYYCSKDGRY YKHENGEYVP LEYDESSVNP PGDIVTYEPS EDDLGRKCAF SQAENVENGC
101: EVSLSNPGET PSESTGCPND QEPEHRQRPS SWVEDTLIEL YLDGYNQHPS ASSYERASGE NNQDCQMLSA NGDDDAEELE EGEWIPEEDF DPQEENFGEA
201: APSSEEERWL AQYGQVIESP GKTLPEIPSV DLWDWKLVCE TREADNEQVA RLVGRLVRQS ANLHPSVVSG GTLLKTAPIC EARLHLVRVR TGQVYKLRNP
301: SAKYLASLSV YDASNPTKDW EFPDISTEWQ NPDTKRKAKK GKPKRASKLT VKPSEVDMIE EKTKRKAKKV KPKADCKLTV KPCEVDMFEE QETKREAKKV
401: KPKTDCKLTV KPRDEVNMIE ERSCSYRDRA AERRNLHGGY GVGPGQKGTT VDHNTDEHSV PDTGSEEDTV AEALELSFGS GSYARRIMGN MGWKEGETLG
501: KNTKGLVEPI QAVGNTGNVG LGFPQRRRK
101: EVSLSNPGET PSESTGCPND QEPEHRQRPS SWVEDTLIEL YLDGYNQHPS ASSYERASGE NNQDCQMLSA NGDDDAEELE EGEWIPEEDF DPQEENFGEA
201: APSSEEERWL AQYGQVIESP GKTLPEIPSV DLWDWKLVCE TREADNEQVA RLVGRLVRQS ANLHPSVVSG GTLLKTAPIC EARLHLVRVR TGQVYKLRNP
301: SAKYLASLSV YDASNPTKDW EFPDISTEWQ NPDTKRKAKK GKPKRASKLT VKPSEVDMIE EKTKRKAKKV KPKADCKLTV KPCEVDMFEE QETKREAKKV
401: KPKTDCKLTV KPRDEVNMIE ERSCSYRDRA AERRNLHGGY GVGPGQKGTT VDHNTDEHSV PDTGSEEDTV AEALELSFGS GSYARRIMGN MGWKEGETLG
501: KNTKGLVEPI QAVGNTGNVG LGFPQRRRK
Arabidopsis Description
D111/G-patch domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JKK9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.