Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0010g01500.t01 | Wine grape | nucleus | 23.15 | 45.63 |
| VIT_01s0010g01530.t01 | Wine grape | nucleus | 35.47 | 37.11 |
| VIT_03s0088g00600.t01 | Wine grape | nucleus | 38.42 | 36.45 |
| PGSC0003DMT400090264 | Potato | mitochondrion | 27.09 | 36.18 |
| PGSC0003DMT400097162 | Potato | nucleus | 28.57 | 35.15 |
| VIT_03s0088g00590.t01 | Wine grape | nucleus | 36.95 | 35.05 |
| VIT_03s0088g00550.t01 | Wine grape | nucleus | 36.45 | 34.74 |
| VIT_03s0088g00510.t01 | Wine grape | nucleus | 37.44 | 33.93 |
| Solyc01g060310.1.1 | Tomato | nucleus, plastid | 23.15 | 33.81 |
| PGSC0003DMT400088636 | Potato | mitochondrion | 19.21 | 33.33 |
| PGSC0003DMT400097714 | Potato | mitochondrion | 24.14 | 32.67 |
| AT2G34440.1 | Thale cress | nucleus | 27.59 | 32.56 |
| PGSC0003DMT400016092 | Potato | mitochondrion | 31.53 | 32.49 |
| VIT_03s0088g00610.t01 | Wine grape | cytosol | 34.48 | 31.96 |
| Bra021910.1-P | Field mustard | nucleus | 27.59 | 30.77 |
| KRH41505 | Soybean | cytosol, nucleus, plastid | 23.65 | 29.81 |
| KRH45604 | Soybean | nucleus | 27.59 | 29.63 |
| Bra001209.1-P | Field mustard | nucleus | 26.11 | 29.61 |
| CDX74094 | Canola | nucleus | 26.11 | 29.61 |
| CDY57614 | Canola | nucleus | 26.11 | 29.61 |
| KRG99424 | Soybean | nucleus | 26.11 | 29.12 |
| KRH60217 | Soybean | nucleus | 25.12 | 28.81 |
| VIT_10s0003g03970.t01 | Wine grape | nucleus | 29.56 | 28.57 |
| KRH41503 | Soybean | nucleus | 22.17 | 28.12 |
| KRH60216 | Soybean | nucleus | 25.62 | 28.11 |
| VIT_07s0005g06590.t01 | Wine grape | nucleus | 29.06 | 28.1 |
| PGSC0003DMT400094407 | Potato | mitochondrion | 29.06 | 27.96 |
| PGSC0003DMT400086619 | Potato | nucleus | 25.62 | 27.96 |
| PGSC0003DMT400092385 | Potato | mitochondrion | 27.09 | 27.92 |
| PGSC0003DMT400094024 | Potato | golgi, mitochondrion | 25.12 | 27.87 |
| AT3G66656.1 | Thale cress | nucleus | 24.14 | 27.53 |
| PGSC0003DMT400097135 | Potato | mitochondrion | 25.62 | 27.51 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 28.08 | 23.36 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 27.09 | 22.36 |
| Solyc01g060300.1.1 | Tomato | nucleus | 23.15 | 22.27 |
| PGSC0003DMT400086182 | Potato | cytosol | 12.32 | 19.53 |
| PGSC0003DMT400092220 | Potato | cytosol | 11.82 | 18.75 |
| PGSC0003DMT400090145 | Potato | nucleus | 11.82 | 15.89 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 24.63 | 14.41 |
Protein Annotations
| EntrezGene:100254278 | wikigene:100254278 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | ProteinID:CBI41022 | ProteinID:CBI41022.3 |
| ncoils:Coil | UniProt:D7UE57 | EMBL:FN596788 | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 |
| EntrezGene:LOC100254278 | wikigene:LOC100254278 | InterPro:MADS_MEF2-like | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF185 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf |
| UniParc:UPI0001983A30 | ArrayExpress:VIT_00s0386g00010 | EnsemblPlantsGene:VIT_00s0386g00010 | EnsemblPlants:VIT_00s0386g00010.t01 | RefSeq:XP_002263270 | RefSeq:XP_002263270.2 |
Description
No Description!
Coordinates
chrUn:+:26932222..26932833
Molecular Weight (calculated)
22641.1 Da
IEP (calculated)
9.862
GRAVY (calculated)
-0.713
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MERKTNAGRK KIEMKLISAS DARQVTFSKR RSGLFKKASE LATLCDSETA VIAFSPGGKA FSFGHPSVEA VINRYDGQSQ ALDAGDQSVQ TDNLRELIQR
101: YNALLDQLEV EKKRGEAIKR MGMEMKAKTW LLTPVENLNP TQLQILKVLM EDLKKRVYQQ REELSKKART PRPLLDLNTV EPDDPSASNP TKNNSMEGGG
201: GSE
101: YNALLDQLEV EKKRGEAIKR MGMEMKAKTW LLTPVENLNP TQLQILKVLM EDLKKRVYQQ REELSKKART PRPLLDLNTV EPDDPSASNP TKNNSMEGGG
201: GSE
001: MGRRKIKMEM VQDMNTRQVT FSKRRTGLFK KASELATLCN AELGIVVFSP GGKPFSYGKP NLDSVAERFM REYDDSDSGD EEKSGNYRPK LKRLSERLDL
101: LNQEVEAEKE RGEKSQEKLE SAGDERFKES IETLTLDELN EYKDRLQTVH GRIEGQVNHL QASSCLMLLS RK
101: LNQEVEAEKE RGEKSQEKLE SAGDERFKES IETLTLDELN EYKDRLQTVH GRIEGQVNHL QASSCLMLLS RK
Arabidopsis Description
AGL29AGL29 [Source:UniProtKB/TrEMBL;Acc:A0A178VU29]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.