Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400027289 | Potato | cytosol | 82.81 | 82.17 |
| Solyc04g056740.1.1 | Tomato | nucleus | 84.38 | 60.0 |
| PGSC0003DMT400093117 | Potato | nucleus | 82.03 | 58.33 |
| PGSC0003DMT400095190 | Potato | nucleus | 82.03 | 58.33 |
| PGSC0003DMT400094886 | Potato | nucleus | 62.5 | 44.44 |
| PGSC0003DMT400091277 | Potato | nucleus | 57.81 | 41.11 |
| PGSC0003DMT400093319 | Potato | nucleus | 54.69 | 39.33 |
| PGSC0003DMT400090103 | Potato | nucleus | 53.91 | 38.76 |
| PGSC0003DMT400091428 | Potato | nucleus | 50.0 | 37.21 |
| PGSC0003DMT400088968 | Potato | nucleus | 29.69 | 34.55 |
| PGSC0003DMT400086349 | Potato | cytosol, mitochondrion | 26.56 | 33.01 |
| PGSC0003DMT400095917 | Potato | cytosol | 33.59 | 32.58 |
| PGSC0003DMT400097360 | Potato | cytosol | 33.59 | 32.58 |
| PGSC0003DMT400095980 | Potato | nucleus | 40.62 | 30.06 |
| PGSC0003DMT400087813 | Potato | nucleus | 41.41 | 29.12 |
| PGSC0003DMT400090655 | Potato | cytosol | 38.28 | 28.16 |
| PGSC0003DMT400088010 | Potato | cytosol | 35.16 | 27.95 |
| PGSC0003DMT400093647 | Potato | nucleus | 31.25 | 27.78 |
| PGSC0003DMT400089582 | Potato | cytosol | 34.38 | 27.33 |
| PGSC0003DMT400088611 | Potato | nucleus | 35.16 | 27.27 |
| PGSC0003DMT400092871 | Potato | nucleus | 22.66 | 20.71 |
| PGSC0003DMT400094043 | Potato | cytosol | 23.44 | 20.13 |
| PGSC0003DMT400089966 | Potato | cytosol | 25.78 | 19.41 |
| PGSC0003DMT400095957 | Potato | cytosol | 17.19 | 17.05 |
| PGSC0003DMT400095852 | Potato | cytosol | 19.53 | 17.01 |
| PGSC0003DMT400086589 | Potato | mitochondrion | 20.31 | 15.66 |
| PGSC0003DMT400094942 | Potato | nucleus | 14.84 | 14.5 |
| PGSC0003DMT400094062 | Potato | nucleus | 21.88 | 13.73 |
| PGSC0003DMT400013136 | Potato | nucleus | 21.09 | 13.71 |
| PGSC0003DMT400094816 | Potato | golgi, nucleus, plastid | 23.44 | 13.57 |
| PGSC0003DMT400091054 | Potato | plastid | 11.72 | 13.16 |
| PGSC0003DMT400091464 | Potato | mitochondrion | 17.97 | 13.07 |
| AT1G54760.1 | Thale cress | nucleus | 16.41 | 13.04 |
| PGSC0003DMT400090556 | Potato | mitochondrion, nucleus, plastid | 16.41 | 12.57 |
| PGSC0003DMT400095668 | Potato | mitochondrion | 11.72 | 12.3 |
| PGSC0003DMT400085261 | Potato | nucleus | 15.62 | 12.2 |
| PGSC0003DMT400094024 | Potato | golgi, mitochondrion | 17.19 | 12.02 |
| PGSC0003DMT400092448 | Potato | plastid | 20.31 | 11.56 |
| AT1G29962.1 | Thale cress | nucleus | 16.41 | 11.35 |
| PGSC0003DMT400097714 | Potato | mitochondrion | 13.28 | 11.33 |
| PGSC0003DMT400085650 | Potato | mitochondrion | 14.84 | 11.31 |
| PGSC0003DMT400090264 | Potato | mitochondrion | 13.28 | 11.18 |
| PGSC0003DMT400090024 | Potato | nucleus | 14.84 | 11.11 |
| AT1G28450.1 | Thale cress | nucleus | 15.62 | 10.81 |
| AT1G28460.1 | Thale cress | nucleus | 14.84 | 10.44 |
| PGSC0003DMT400097162 | Potato | nucleus | 13.28 | 10.3 |
| PGSC0003DMT400088636 | Potato | mitochondrion | 9.38 | 10.26 |
| PGSC0003DMT400097135 | Potato | mitochondrion | 14.84 | 10.05 |
| CDX99867 | Canola | nucleus | 14.84 | 9.79 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 18.75 | 9.76 |
| PGSC0003DMT400086435 | Potato | nucleus | 7.81 | 9.52 |
| PGSC0003DMT400063794 | Potato | plastid | 17.19 | 9.52 |
| CDY26304 | Canola | nucleus | 13.28 | 9.19 |
| PGSC0003DMT400086619 | Potato | nucleus | 13.28 | 9.14 |
| PGSC0003DMT400016092 | Potato | mitochondrion | 14.06 | 9.14 |
| PGSC0003DMT400000210 | Potato | nucleus | 10.16 | 9.09 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 17.19 | 9.02 |
| Bra032347.1-P | Field mustard | nucleus | 12.5 | 8.6 |
| PGSC0003DMT400094407 | Potato | mitochondrion | 14.06 | 8.53 |
| PGSC0003DMT400002920 | Potato | nucleus | 11.72 | 8.52 |
| PGSC0003DMT400013105 | Potato | nucleus | 13.28 | 7.98 |
| PGSC0003DMT400086182 | Potato | cytosol | 7.81 | 7.81 |
| PGSC0003DMT400092385 | Potato | mitochondrion | 11.72 | 7.61 |
| PGSC0003DMT400092220 | Potato | cytosol | 7.03 | 7.03 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 18.75 | 6.92 |
| PGSC0003DMT400090145 | Potato | nucleus | 7.81 | 6.62 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400097679 | EnsemblPlantsGene:PGSC0003DMG400047250 | PGSC:PGSC0003DMG400047250 | UniParc:UPI00029548CD | UniProt:M1E161 | MapMan:35.2 |
Description
Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400047250]
Coordinates
chr4:+:49282362..49282748
Molecular Weight (calculated)
14413.0 Da
IEP (calculated)
6.229
GRAVY (calculated)
-0.438
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MMISPAGKPH SFFHPIVDAI VSHFQNPGMQ LSQGIRLDTI TARNKVNELK NRLEEHNVVE DATIARTSFY DQMAEIGQKG WWESIEQHNA NEVTIFEAWL
101: SGTCSKMRHQ VQLENGASSS LGRESFGI
101: SGTCSKMRHQ VQLENGASSS LGRESFGI
001: MGRRKIKMEM VQDMNTRQVT FSKRRTGLFK KASELATLCN AELGIVVFSP GGKPFSYGKP NLDSVAERFM REYDDSDSGD EEKSGNYRPK LKRLSERLDL
101: LNQEVEAEKE RGEKSQEKLE SAGDERFKES IETLTLDELN EYKDRLQTVH GRIEGQVNHL QASSCLMLLS RK
101: LNQEVEAEKE RGEKSQEKLE SAGDERFKES IETLTLDELN EYKDRLQTVH GRIEGQVNHL QASSCLMLLS RK
Arabidopsis Description
AGL29AGL29 [Source:UniProtKB/TrEMBL;Acc:A0A178VU29]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.