Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 3
- plasma membrane 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P24410_001 | Banana | cytosol | 93.24 | 92.62 |
| GSMUA_Achr1P27230_001 | Banana | cytosol | 92.57 | 92.57 |
| GSMUA_Achr5P09010_001 | Banana | cytosol | 87.16 | 87.16 |
| GSMUA_Achr4P22570_001 | Banana | cytosol | 81.08 | 81.08 |
| Solyc06g053930.2.1 | Tomato | cytosol | 81.08 | 80.54 |
| GSMUA_Achr7P01390_001 | Banana | cytosol | 80.41 | 80.41 |
| VIT_05s0020g04420.t01 | Wine grape | cytosol | 80.41 | 79.87 |
| PGSC0003DMT400042062 | Potato | cytosol | 80.41 | 79.33 |
| GSMUA_Achr2P12680_001 | Banana | cytosol | 78.38 | 78.38 |
| KRH34350 | Soybean | cytosol | 79.05 | 78.0 |
| KRG92449 | Soybean | cytosol | 78.38 | 77.33 |
| KRH31638 | Soybean | cytosol | 78.38 | 77.33 |
| KRH69070 | Soybean | cytosol | 78.38 | 77.33 |
| AT4G14640.1 | Thale cress | cytosol | 76.35 | 74.83 |
| CDX92965 | Canola | cytosol | 76.35 | 73.38 |
| Bra001892.1-P | Field mustard | cytosol | 76.35 | 73.38 |
| VIT_14s0030g02150.t01 | Wine grape | cytosol | 75.68 | 73.2 |
| GSMUA_Achr6P23670_001 | Banana | cytosol | 73.65 | 73.15 |
| GSMUA_Achr2P01120_001 | Banana | cytosol | 73.65 | 73.15 |
| GSMUA_Achr3P09330_001 | Banana | cytosol | 73.65 | 73.15 |
| GSMUA_Achr3P25040_001 | Banana | cytosol | 73.65 | 73.15 |
| GSMUA_Achr10P... | Banana | cytosol | 73.65 | 73.15 |
| GSMUA_Achr5P07820_001 | Banana | cytosol | 73.65 | 73.15 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane | 73.65 | 73.15 |
| CDY34215 | Canola | cytosol | 77.03 | 73.08 |
| Bra023786.1-P | Field mustard | cytosol | 77.03 | 73.08 |
| GSMUA_Achr9P17280_001 | Banana | cytosol | 72.97 | 72.48 |
| GSMUA_Achr6P15990_001 | Banana | cytosol | 72.97 | 72.48 |
| Bra033898.1-P | Field mustard | cytosol | 75.68 | 72.26 |
| CDY10686 | Canola | cytosol | 75.0 | 71.61 |
| GSMUA_Achr5P27590_001 | Banana | cytosol | 56.08 | 71.55 |
| GSMUA_AchrUn_... | Banana | cytosol | 70.95 | 71.43 |
| CDX94883 | Canola | cytosol | 53.38 | 71.17 |
| KRH68729 | Soybean | cytosol | 71.62 | 71.14 |
| KRH67274 | Soybean | cytosol | 70.95 | 70.95 |
| GSMUA_Achr7P07720_001 | Banana | cytosol | 70.95 | 70.95 |
| CDY06478 | Canola | cytosol | 71.62 | 70.2 |
| KRG96966 | Soybean | cytosol | 70.27 | 69.8 |
| GSMUA_Achr11P... | Banana | cytosol | 47.97 | 69.61 |
| Bra039723.1-P | Field mustard | cytosol | 70.95 | 68.63 |
| CDY10325 | Canola | cytosol | 52.03 | 68.14 |
| VIT_00s0179g00280.t01 | Wine grape | cytosol | 67.57 | 67.11 |
| KRG95596 | Soybean | cytosol | 66.89 | 66.89 |
| KRG92667 | Soybean | cytosol | 66.22 | 65.77 |
| KRH34082 | Soybean | cytosol | 66.22 | 65.77 |
| PGSC0003DMT400034833 | Potato | cytosol | 67.57 | 65.36 |
| AT3G22930.1 | Thale cress | cytosol | 76.35 | 65.32 |
| Solyc03g005240.1.1 | Tomato | cytosol | 66.89 | 64.71 |
| CDY40824 | Canola | cytosol | 77.03 | 63.33 |
| Solyc01g105630.2.1 | Tomato | cytosol | 59.46 | 59.86 |
| PGSC0003DMT400083727 | Potato | cytosol | 58.78 | 59.18 |
| KRG94637 | Soybean | cytosol | 45.27 | 58.77 |
| KRH71363 | Soybean | cytosol | 55.41 | 55.03 |
| KRH32074 | Soybean | cytosol | 54.05 | 53.69 |
| GSMUA_Achr3P25390_001 | Banana | cytosol | 64.19 | 51.91 |
| GSMUA_Achr10P... | Banana | cytosol | 62.84 | 49.47 |
| GSMUA_Achr1P14070_001 | Banana | cytosol | 74.32 | 48.67 |
| GSMUA_Achr10P... | Banana | cytosol | 61.49 | 48.15 |
| GSMUA_Achr6P10140_001 | Banana | cytosol | 41.22 | 37.42 |
| GSMUA_Achr9P21860_001 | Banana | cytosol, mitochondrion | 39.86 | 36.2 |
| GSMUA_Achr1P25220_001 | Banana | cytosol | 39.19 | 35.58 |
| GSMUA_Achr8P29750_001 | Banana | cytosol, mitochondrion | 39.19 | 35.37 |
| GSMUA_Achr3P26750_001 | Banana | cytosol, plasma membrane | 35.14 | 35.14 |
| GSMUA_Achr8P05790_001 | Banana | cytosol | 37.16 | 22.45 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P04700_001 | EnsemblPlants:GSMUA_Achr1T04700_001 | EnsemblPlantsGene:GSMUA_Achr1G04700_001 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 |
| PANTHER:PTHR23050:SF336 | PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI000294A7CF | UniProt:M0RX28 | MapMan:35.1 | : | : | : |
Description
Calmodulin-like protein 8 [Source:GMGC_GENE;Acc:GSMUA_Achr1G04700_001]
Coordinates
chr1:-:3904696..3907818
Molecular Weight (calculated)
16977.0 Da
IEP (calculated)
3.916
GRAVY (calculated)
-0.483
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRLSADQIS EFQEAFCLFD KDGDGCITLE ELATVIRSLG QYPTEEELKD MIREVDINGN GTIEFTEFLN LMARKMKESD AEEELREAFK VFDKDQNGYI
101: SATELRNVMI NLGEKMTDEE VLQMIKEADT DGDGQVNFEE FSRMMMAV
101: SATELRNVMI NLGEKMTDEE VLQMIKEADT DGDGQVNFEE FSRMMMAV
001: MEETALTKDQ ITEFKEAFCL FDKDGDGCIT VEELATVIRS LDQNPTEQEL HDIITEIDSD SNGTIEFAEF LNLMAKKLQE SDAEEELKEA FKVFDKDQNG
101: YISASELSHV MINLGEKLTD EEVEQMIKEA DLDGDGQVNY DEFVKMMINI D
101: YISASELSHV MINLGEKLTD EEVEQMIKEA DLDGDGQVNY DEFVKMMINI D
Arabidopsis Description
CML8Calmodulin-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O23320]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.