Factsheet for GSMUA_Achr9P00040_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
plasma membrane 1
nucleus 1
mitochondrion 3
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P04700_001
GSMUA_Achr1P14070_001
GSMUA_Achr1P27230_001
GSMUA_Achr2P01120_001
GSMUA_Achr2P12680_001
GSMUA_Achr3P09330_001
GSMUA_Achr3P25040_001
GSMUA_Achr3P25390_001
GSMUA_Achr4P22570_001
GSMUA_Achr5P07820_001
GSMUA_Achr5P09010_001
GSMUA_Achr5P27590_001
GSMUA_Achr6P15990_001
GSMUA_Achr6P23670_001
GSMUA_Achr6P24410_001
GSMUA_Achr7P01390_001
GSMUA_Achr8P05790_001
GSMUA_Achr9P17280_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G18950.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT4G18950.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT4G18950.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT4G18950.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT4G18950.1	GSMUA_Achr11P...	AT2G41090.1	17360592
AT4G18950.1	GSMUA_Achr2P01120_001	AT2G41090.1	17360592
AT4G18950.1	GSMUA_Achr3P09330_001	AT2G41090.1	17360592
AT4G18950.1	GSMUA_Achr3P25040_001	AT2G41090.1	17360592
AT4G18950.1	GSMUA_Achr5P07820_001	AT2G41090.1	17360592
AT4G18950.1	GSMUA_Achr5P27590_001	AT2G41090.1	17360592
AT4G18950.1	GSMUA_Achr6P15990_001	AT2G41090.1	17360592
AT4G18950.1	GSMUA_Achr6P23670_001	AT2G41090.1	17360592
AT4G18950.1	GSMUA_Achr8P05790_001	AT2G41090.1	17360592
AT4G18950.1	GSMUA_Achr9P17280_001	AT2G41090.1	17360592
AT4G18950.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT4G18950.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT4G18950.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT4G18950.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT4G18950.1	GSMUA_Achr11P...	AT2G41100.1	17360592
AT4G18950.1	GSMUA_Achr2P01120_001	AT2G41100.1	17360592
AT4G18950.1	GSMUA_Achr3P09330_001	AT2G41100.1	17360592
AT4G18950.1	GSMUA_Achr3P25040_001	AT2G41100.1	17360592
AT4G18950.1	GSMUA_Achr5P07820_001	AT2G41100.1	17360592
AT4G18950.1	GSMUA_Achr5P27590_001	AT2G41100.1	17360592
AT4G18950.1	GSMUA_Achr6P15990_001	AT2G41100.1	17360592
AT4G18950.1	GSMUA_Achr6P23670_001	AT2G41100.1	17360592
AT4G18950.1	GSMUA_Achr8P05790_001	AT2G41100.1	17360592
AT4G18950.1	GSMUA_Achr9P17280_001	AT2G41100.1	17360592
AT4G18950.1	GSMUA_Achr1P04700_001	AT4G14640.1	17360592
AT4G18950.1	GSMUA_Achr1P14070_001	AT4G14640.1	17360592
AT4G18950.1	GSMUA_Achr1P27230_001	AT4G14640.1	17360592
AT4G18950.1	GSMUA_Achr2P12680_001	AT4G14640.1	17360592
AT4G18950.1	GSMUA_Achr3P25390_001	AT4G14640.1	17360592
AT4G18950.1	GSMUA_Achr4P22570_001	AT4G14640.1	17360592
AT4G18950.1	GSMUA_Achr5P09010_001	AT4G14640.1	17360592
AT4G18950.1	GSMUA_Achr6P24410_001	AT4G14640.1	17360592
AT4G18950.1	GSMUA_Achr7P01390_001	AT4G14640.1	17360592
AT4G18950.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT4G18950.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT4G18950.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT4G18950.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT4G18950.1	GSMUA_Achr11P...	AT5G21274.1	17360592
AT4G18950.1	GSMUA_Achr2P01120_001	AT5G21274.1	17360592
AT4G18950.1	GSMUA_Achr3P09330_001	AT5G21274.1	17360592
AT4G18950.1	GSMUA_Achr3P25040_001	AT5G21274.1	17360592
AT4G18950.1	GSMUA_Achr5P07820_001	AT5G21274.1	17360592
AT4G18950.1	GSMUA_Achr5P27590_001	AT5G21274.1	17360592
AT4G18950.1	GSMUA_Achr6P15990_001	AT5G21274.1	17360592
AT4G18950.1	GSMUA_Achr6P23670_001	AT5G21274.1	17360592
AT4G18950.1	GSMUA_Achr8P05790_001	AT5G21274.1	17360592
AT4G18950.1	GSMUA_Achr9P17280_001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P26030_001	Banana	cytosol	58.82	49.57
GSMUA_Achr2P09520_001	Banana	cytosol	57.54	48.91
GSMUA_Achr7P24910_001	Banana	cytosol	57.03	48.06
KRH11091	Soybean	nucleus	55.24	47.37
KRH21151	Soybean	nucleus	54.99	47.25
VIT_10s0003g02060.t01	Wine grape	cytosol	55.75	47.19
Solyc02g071740.2.1	Tomato	cytosol	55.24	46.85
PGSC0003DMT400035023	Potato	cytosol	55.24	46.75
Solyc03g005920.2.1	Tomato	cytosol	54.99	46.54
PGSC0003DMT400073140	Potato	cytosol	54.73	46.42
Bra020982.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	47.57	45.15
CDX99407	Canola	cytosol	49.62	42.27
Bra013363.1-P	Field mustard	cytosol	49.1	41.83
CDX78907	Canola	cytosol	49.1	41.83
CDX76504	Canola	cytosol	48.59	41.39
AT4G18950.1	Thale cress	cytosol	48.59	41.39
GSMUA_Achr8P16850_001	Banana	cytosol	31.2	36.31
GSMUA_Achr9P02480_001	Banana	cytosol	36.57	32.21
GSMUA_Achr8P08560_001	Banana	mitochondrion	35.81	30.3
GSMUA_Achr2P11410_001	Banana	mitochondrion	36.83	29.94
GSMUA_Achr6P10820_001	Banana	cytosol	33.5	28.54
GSMUA_Achr10P...	Banana	plastid	36.32	28.46
GSMUA_Achr8P16840_001	Banana	cytosol	4.09	11.51
GSMUA_Achr9P00030_001	Banana	cytosol	5.63	11.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr9G00040_001	EnsemblPlants:GSMUA_Achr9P00040_001	EnsemblPlants:GSMUA_Achr9T00040_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M0TW61	PFAM:PF07714	PIRSF:PIRSF000654	PRINTS:PR00109	PFscan:PS50011	PANTHER:PTHR44023
PANTHER:PTHR44023:SF7	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix	UniParc:UPI000295F317

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G00040_001]

Coordinates

chr9:+:111281..120362

Molecular Weight (calculated)

45192.9 Da

IEP (calculated)

9.266

GRAVY (calculated)

-0.264

Length

391 amino acids

Sequence
(BLAST)

001: MPIYWRTNIY QGLPYRSIPP VPVRQVTGTR IARYRYSATV LYCSIATILY CSIATILQYY TVALLQYEKN KKNIRYIRAY HSVHPDVPPG IPLPYRTEPG
101: SKRRYGTGTF RVVTWHGIQV AVKRFNEDII ADEDKVKAFR DELALLQQIR HPNVVQFLGA VTQSSPMMIV TEYLPKGDLR AFLKREGAQT PASAVRYALD
201: IARGMNYLHE HKPEAIIHRD LEPSNILLDD TGHLKVADFD VSKLLKVAKT AREDRPLTCL DACRYVAPEV FRNEEYDTKV DVFAFSLILQ EMIEGCPPFC
301: YMQDADVPKA YASNERPPFR TQKLYAHGLK ELIERCWSQD PAERPTFNEI IDRLSIILNK IGQRRRWKVY LGGPRLLLYR CNFISCSFCI M

Best Arabidopsis Sequence Match ( AT3G58760.3 )
(BLAST)

001: MMSREEENEY DTSPALRGKP LKPADWLGLF FLLFFFFSVA AVTVPFTAHI ACGRKFSPSP LLNMTIKPKS PARFKLGRQS SLAPESRTPI DTLTEDEDDD
101: LAAAATAGIG DPTIRLMYLA NEGDIDGINK MLDSGTNVDY RDIDARTALH VAACQGRTDV VELLLSRGAK VDTKDRWGST PLADAVYYKN HDVIKLLEKH
201: GAKPTIAPMH VLTDKEVPEY EIHPTELDFS NSVKISKGTF NKASWRGIDV AVKTFGEEMF TDEDKVNAFR DELALLQKIR HPNVVQFLGA VTQSTPMMIV
301: TEYLPKGDLR QYLDRKGPLM PAHAVKFALE IARGMNYLHE HKPEAIIHCD LEPPNILRDD SGHLKVADFG VSKLLVVKKT VKKDRPVVTC LDSSWRYMAP
401: EVYRNEEYDT KVDVFSFALI LQEMIEGCEP FHEIEDREVP KAYIEDERPP FNAPTKSYPF GLQELIQDCW DKEASKRPTF RVIISTLELI SDRIARKRSW
501: KVMLGRCLPR FRLFTKRDYV NPGGSNRSSG SFNR

Arabidopsis Description

Integrin-linked protein kinase family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMD5]
SUBAcon: [plasma membrane,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.