Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g071740.2.1 | Tomato | cytosol | 97.83 | 97.83 |
| PGSC0003DMT400035023 | Potato | cytosol | 79.83 | 79.65 |
| VIT_10s0003g02060.t01 | Wine grape | cytosol | 76.36 | 76.19 |
| KRH11091 | Soybean | nucleus | 71.8 | 72.59 |
| KRH21151 | Soybean | nucleus | 71.58 | 72.53 |
| GSMUA_Achr6P26030_001 | Banana | cytosol | 71.15 | 70.69 |
| Bra020982.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 59.65 | 66.75 |
| GSMUA_Achr2P09520_001 | Banana | cytosol | 66.59 | 66.74 |
| CDX99407 | Canola | cytosol | 65.51 | 65.8 |
| AT4G18950.1 | Thale cress | cytosol | 65.29 | 65.58 |
| Bra013363.1-P | Field mustard | cytosol | 65.08 | 65.36 |
| CDX78907 | Canola | cytosol | 65.08 | 65.36 |
| PGSC0003DMT400044544 | Potato | cytosol | 56.83 | 65.17 |
| GSMUA_Achr7P24910_001 | Banana | cytosol | 65.29 | 64.87 |
| CDX76504 | Canola | cytosol | 64.21 | 64.49 |
| Os01t0748600-02 | Rice | cytosol | 62.69 | 61.75 |
| EES03608 | Sorghum | cytosol | 63.34 | 61.73 |
| Zm00001d043459_P005 | Maize | cytosol | 55.1 | 61.06 |
| TraesCS3A01G272900.1 | Wheat | nucleus | 61.61 | 60.55 |
| TraesCS3D01G272300.1 | Wheat | cytosol | 61.82 | 60.38 |
| HORVU3Hr1G071430.7 | Barley | cytosol | 61.17 | 60.13 |
| TraesCS3B01G306500.1 | Wheat | nucleus | 61.17 | 59.75 |
| GSMUA_Achr9P00030_001 | Banana | cytosol | 23.86 | 55.0 |
| GSMUA_Achr9P00040_001 | Banana | mitochondrion | 46.42 | 54.73 |
| PGSC0003DMT400064944 | Potato | mitochondrion, plastid | 42.95 | 41.95 |
| PGSC0003DMT400052486 | Potato | nucleus, plastid | 42.52 | 41.79 |
| PGSC0003DMT400072865 | Potato | cytosol | 38.83 | 41.15 |
| PGSC0003DMT400026617 | Potato | cytosol | 24.08 | 39.64 |
| PGSC0003DMT400078613 | Potato | cytosol | 27.33 | 29.3 |
Protein Annotations
| Gene3D:1.10.510.10 | Gene3D:1.25.40.20 | EntrezGene:102587092 | MapMan:18.4.1.30 | Gene3D:3.30.200.20 | InterPro:Ankyrin_rpt |
| InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:Kinase-like_dom_sf | UniProt:M1CRL2 | PFAM:PF07714 |
| PFAM:PF12796 | EnsemblPlantsGene:PGSC0003DMG400028443 | PGSC:PGSC0003DMG400028443 | EnsemblPlants:PGSC0003DMT400073140 | PIRSF:PIRSF000654 | PRINTS:PR00109 |
| PFscan:PS50011 | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR44023 | PANTHER:PTHR44023:SF7 | InterPro:Prot_kinase_dom |
| SMART:SM00248 | SUPFAM:SSF48403 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | UniParc:UPI00029619BC | RefSeq:XP_006358070.1 |
| SEG:seg | : | : | : | : | : |
Description
Integrin-linked protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400028443]
Coordinates
chr2:-:31046094..31053689
Molecular Weight (calculated)
52361.3 Da
IEP (calculated)
5.771
GRAVY (calculated)
-0.527
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPVRFLLGK QSSLAPEKVI AAVEIESEDG EEGDVIDIDP RIRLMYSANE GDIEGIKELL DLGTDVNFRD DDERTALHVA ACQGYSDVVQ LLVDNGAEID
101: SEDRWGSTPL GDAIHYKNHH VIKLLEEHGA KPPMAPMHVN NSREVPEYEI DAKELDFTNS IELAKGTFHI ASWRGIQVAV KKFGDDEIAD EDKVTAFRDE
201: LALLQKIRHP NVVQFLGAVT QSSPMMIVTE YLPKGDLHAY LKNEEPLRPT KAIRFAIDIA RGLNYLHEIK PEAIIHRDLE PSNILRDDTG HLKVADFGVS
301: KLLKVTNRVK EDKPLTCDNT SCRYVAPEVF KNEEYDTKVD VFSFALILQE MIEGCPPFKA KNENEVPKHY AAKERPPFKA PAKVYAHGLR ELIEECWNEN
401: PSMRPTFKKI IPRLEAIYNK FGHKRRWKVR PLKCFQNFEA MWKKENSSSS RNGSSRSNSS I
101: SEDRWGSTPL GDAIHYKNHH VIKLLEEHGA KPPMAPMHVN NSREVPEYEI DAKELDFTNS IELAKGTFHI ASWRGIQVAV KKFGDDEIAD EDKVTAFRDE
201: LALLQKIRHP NVVQFLGAVT QSSPMMIVTE YLPKGDLHAY LKNEEPLRPT KAIRFAIDIA RGLNYLHEIK PEAIIHRDLE PSNILRDDTG HLKVADFGVS
301: KLLKVTNRVK EDKPLTCDNT SCRYVAPEVF KNEEYDTKVD VFSFALILQE MIEGCPPFKA KNENEVPKHY AAKERPPFKA PAKVYAHGLR ELIEECWNEN
401: PSMRPTFKKI IPRLEAIYNK FGHKRRWKVR PLKCFQNFEA MWKKENSSSS RNGSSRSNSS I
001: MEEDYQQPRF TIGRQSSMAP EKIPEPSVHS EEEVFEDGEE IDGGVRLMYL ANEGDIEGIK ELIDSGIDAN YRDIDDRTAL HVAACQGLKD VVELLLDRKA
101: EVDPKDRWGS TPFADAIFYK NIDVIKILEI HGAKHPMAPM HVKTAREVPE YEINPSELDF TQSKEITKGT YCMAMWRGIQ VAVKKLDDEV LSDDDQVRKF
201: HDELALLQRL RHPNIVQFLG AVTQSNPMMI VTEYLPRGDL RELLKRKGQL KPATAVRYAL DIARGMSYLH EIKGDPIIHR DLEPSNILRD DSGHLKVADF
301: GVSKLVTVKE DKPFTCQDIS CRYIAPEVFT SEEYDTKADV FSFALIVQEM IEGRMPFAEK EDSEASEAYA GKHRPLFKAP SKNYPHGLKT LIEECWHEKP
401: AKRPTFREII KRLESILHHM GHKRQWRMRP LTCFQNFEHK KKHNWDLSSH DGSSSGSHL
101: EVDPKDRWGS TPFADAIFYK NIDVIKILEI HGAKHPMAPM HVKTAREVPE YEINPSELDF TQSKEITKGT YCMAMWRGIQ VAVKKLDDEV LSDDDQVRKF
201: HDELALLQRL RHPNIVQFLG AVTQSNPMMI VTEYLPRGDL RELLKRKGQL KPATAVRYAL DIARGMSYLH EIKGDPIIHR DLEPSNILRD DSGHLKVADF
301: GVSKLVTVKE DKPFTCQDIS CRYIAPEVFT SEEYDTKADV FSFALIVQEM IEGRMPFAEK EDSEASEAYA GKHRPLFKAP SKNYPHGLKT LIEECWHEKP
401: AKRPTFREII KRLESILHHM GHKRQWRMRP LTCFQNFEHK KKHNWDLSSH DGSSSGSHL
Arabidopsis Description
At4g18950/F13C5_120 [Source:UniProtKB/TrEMBL;Acc:Q93Z30]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.