Factsheet for PGSC0003DMT400064944

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g014450.2.1	Tomato	mitochondrion	99.36	99.36
PGSC0003DMT400052486	Potato	nucleus, plastid	80.93	81.45
CDY19106	Canola	mitochondrion	50.42	79.07
KRH59134	Soybean	plastid	77.97	77.47
KRH43026	Soybean	nucleus	76.91	76.42
VIT_05s0094g01080.t01	Wine grape	plastid	76.06	76.06
AT2G31800.1	Thale cress	mitochondrion	76.06	75.42
Bra021744.1-P	Field mustard	mitochondrion	71.4	74.72
CDY15369	Canola	cytosol	46.19	74.15
Bra022866.1-P	Field mustard	mitochondrion	69.49	73.54
CDY15368	Canola	mitochondrion	28.18	73.48
CDX79441	Canola	mitochondrion	72.88	70.78
CDX84758	Canola	mitochondrion	72.88	70.78
KRH18929	Soybean	cytosol	9.75	68.66
GSMUA_Achr2P11410_001	Banana	mitochondrion	67.58	66.32
CDY19105	Canola	cytosol	24.36	66.09
GSMUA_Achr8P08560_001	Banana	mitochondrion	64.62	66.02
GSMUA_Achr10P...	Banana	plastid	69.07	65.33
GSMUA_Achr9P02480_001	Banana	cytosol	60.59	64.41
KXG30604	Sorghum	mitochondrion	63.98	61.76
TraesCS6D01G201400.1	Wheat	mitochondrion	61.86	60.96
Os01t0892800-02	Rice	nucleus, plastid	61.23	60.59
TraesCS6B01G247800.1	Wheat	mitochondrion	61.65	60.5
HORVU6Hr1G055820.2	Barley	mitochondrion	61.86	60.46
TraesCS6A01G218200.1	Wheat	mitochondrion	61.65	60.25
TraesCS3D01G395000.1	Wheat	cytosol, plastid	60.38	58.88
TraesCS3B01G433600.1	Wheat	cytosol, plastid	60.17	58.68
TraesCS3A01G400600.1	Wheat	cytosol, plastid	60.17	58.68
Os02t0608500-01	Rice	plasma membrane	61.44	57.77
KXG33869	Sorghum	mitochondrion	57.63	56.9
Zm00001d017167_P001	Maize	mitochondrion	48.52	56.4
HORVU3Hr1G090030.12	Barley	cytosol, plastid	60.17	55.36
Zm00001d042551_P003	Maize	plastid	57.42	52.72
PGSC0003DMT400044544	Potato	cytosol	37.5	44.03
PGSC0003DMT400073140	Potato	cytosol	41.95	42.95
PGSC0003DMT400035023	Potato	cytosol	41.31	42.21
PGSC0003DMT400026617	Potato	cytosol	22.46	37.86
PGSC0003DMT400072865	Potato	cytosol	34.11	37.01
PGSC0003DMT400078613	Potato	cytosol	27.54	30.23

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	MapMan:18.4.1.30	Gene3D:3.30.200.20	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	InterPro:Kinase-like_dom_sf	UniProt:M1CD55	PFAM:PF07714	PFAM:PF12796
EnsemblPlantsGene:PGSC0003DMG400025222	PGSC:PGSC0003DMG400025222	EnsemblPlants:PGSC0003DMT400064944	PIRSF:PIRSF000654	PFscan:PS50011	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF4	InterPro:Prot_kinase_dom	SMART:SM00248	SUPFAM:SSF48403
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI000294D9B3	:	:	:

Description

Integrin-linked protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400025222]

Coordinates

chr8:-:7781181..7788798

Molecular Weight (calculated)

53492.8 Da

IEP (calculated)

9.602

GRAVY (calculated)

-0.440

Length

472 amino acids

Sequence
(BLAST)

001: MDMKKRLTRG ISRQFSTGSL RMSGKFSFKR QNSMDPRNNN MRFSFGRQSS LDPIRRCPSF ENETIAVPDN LDSTMQLLFM ACKGDVNGVK DLLDEDVDVN
101: SIDLDGRTAL HIAACEGHVE VSKLLLSRKA NIDARDRWGS TAAADAKYYG NNEVYNILKA RGAKVPKLRN TPMTVANPRE VPEYELNPLE LQIRKRDGIS
201: KGSYQVAKWN GTKVSVKILD KDSYADPEII NAFKHELTLL ERVRHPNVVQ FVGAVTQNIP MMIVIEYHPR GDLGSYLQKK GRLSPSKVLR FALDIARGMN
301: YLHECKPDPI IHCLLMPKNI LQDNGGLLKV AGFGLIRLSN ISPDKAKSLQ PQAIDRASTY IAPEIYKDEI FDRSVDVYAF GVLLYEMMEG SPPFHPKSPE
401: EAARLMCKEG KRPSFKSKSK YPPDLRELIE ECWNPDSFIR PTFSEIIVRM NKIVANCSKH GWLKDTLKLP WL

Best Arabidopsis Sequence Match ( AT2G43850.3 )
(BLAST)

001: MENITAQLKR GISRQFSTGS IRRTLSRQFT RQSSLDPRRT NMRFSFGRQS SLDPIRRSPD SSKSDDEPHM SVPENLDSTM QLLFMASKGD VRGIEELLDE
101: GIDVNSIDLD GRTALHIAAC EGHLGVVKAL LSRRANIDAR DRWGSTAAAD AKYYGNLDVY NLLKARGAKV PKTRKTPMTV SNPREVPEYE LNPLEVQVRK
201: SDGISKGAYQ VAKWNGTRVS VKILDKDSYS DPERINAFRH ELTLLEKVRH PNVIQFVGAV TQNIPMMIVV EYNPKGDLSV YLQKKGRLSP SKALRFALDI
301: ARGMNYLHEC KPDPIIHCDL KPKNILLDRG GQLKISGFGM IRLSKISQDK AKVANHKAHI DLSNYYIAPE VYKDEIFDLR VDAHSFGVIL YEITEGVPVF
401: HPRPPEEVAR MMCLEGKRPV FKTKSRSYPP DIKELIEKCW HPEAGIRPTF SEIIIRLDKI VANCSKQGWW KDTFKFPW

Arabidopsis Description

ILK1Integrin-linked protein kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IS56]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.