CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84758	Canola	mitochondrion	99.59	99.59
Bra022866.1-P	Field mustard	mitochondrion	91.15	99.33
AT2G31800.1	Thale cress	mitochondrion	89.3	91.18
CDY19106	Canola	mitochondrion	56.17	90.7
CDY15369	Canola	cytosol	54.73	90.48
CDY15368	Canola	mitochondrion	33.33	89.5
CDY19105	Canola	cytosol	30.66	85.63
VIT_05s0094g01080.t01	Wine grape	plastid	74.07	76.27
KRH59134	Soybean	plastid	74.07	75.79
KRH43026	Soybean	nucleus	73.87	75.58
PGSC0003DMT400064944	Potato	mitochondrion, plastid	70.78	72.88
Solyc08g014450.2.1	Tomato	mitochondrion	70.58	72.67
CDX67815	Canola	plastid	70.37	71.85
CDX98397	Canola	plastid	70.16	71.64
PGSC0003DMT400052486	Potato	nucleus, plastid	68.93	71.43
Solyc12g019410.1.1	Tomato	plastid	68.72	71.22
CDX71872	Canola	cytosol, plastid	69.96	70.98
CDY05975	Canola	nucleus, plastid	69.55	70.56
KRH18929	Soybean	cytosol	8.85	64.18
GSMUA_Achr10P...	Banana	plastid	65.84	64.13
GSMUA_Achr2P11410_001	Banana	mitochondrion	63.17	63.83
GSMUA_Achr8P08560_001	Banana	mitochondrion	59.05	62.12
GSMUA_Achr9P02480_001	Banana	cytosol	56.58	61.94
KXG30604	Sorghum	mitochondrion	61.11	60.74
TraesCS6D01G201400.1	Wheat	mitochondrion	59.05	59.92
TraesCS6B01G247800.1	Wheat	mitochondrion	59.26	59.88
TraesCS6A01G218200.1	Wheat	mitochondrion	59.26	59.63
HORVU6Hr1G055820.2	Barley	mitochondrion	59.05	59.42
Os01t0892800-02	Rice	nucleus, plastid	57.61	58.7
TraesCS3D01G395000.1	Wheat	cytosol, plastid	57.0	57.23
Os02t0608500-01	Rice	plasma membrane	59.05	57.17
TraesCS3B01G433600.1	Wheat	cytosol, plastid	56.79	57.02
TraesCS3A01G400600.1	Wheat	cytosol, plastid	56.79	57.02
KXG33869	Sorghum	mitochondrion	55.76	56.69
Zm00001d017167_P001	Maize	mitochondrion	45.27	54.19
HORVU3Hr1G090030.12	Barley	cytosol, plastid	57.0	54.0
Zm00001d042551_P003	Maize	plastid	55.56	52.53
CDX89004	Canola	mitochondrion	42.18	43.8
CDY00588	Canola	mitochondrion	41.98	43.59
CDX71924	Canola	mitochondrion	41.56	43.35
CDX78907	Canola	cytosol	39.71	42.05
CDX99407	Canola	cytosol	39.71	42.05
CDX76504	Canola	cytosol	38.27	40.52
CDY36424	Canola	cytosol	31.07	34.79
CDX98142	Canola	cytosol	30.86	34.56
CDY16124	Canola	cytosol	30.86	34.25
CDY33786	Canola	cytosol	30.66	34.02
CDY49253	Canola	cytosol	41.77	18.66
CDX71868	Canola	extracellular	11.11	13.92
CDX71869	Canola	cytosol	5.56	8.26
CDX71871	Canola	cytosol	5.56	7.65

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:A0A078CQH4	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDX79441	ProteinID:CDX79441	ProteinID:CDX79441.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00132173001	InterPro:IPR000719	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFAM:PF12796	PIRSF:PIRSF000654	PRINTS:PR00109
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF4
InterPro:Prot_kinase_dom	SMART:SM00220	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EF074A	SEG:seg	:	:	:

Description

BnaC03g17770D

Coordinates

chrLK031818:-:56135..60788

Molecular Weight (calculated)

54747.2 Da

IEP (calculated)

9.479

GRAVY (calculated)

-0.377

Length

486 amino acids

Sequence
(BLAST)

001: MANIAGQLKR GISRQLSSVS LRRTFSRQFT RQASHDPRRI NMRFSFGRQS SLDPIRRSPE GSGHPQLAVP DNLDATMQLL FVACRGDVEG VQDLLDEGID
101: VNSIDLDGRT ALHIAACEGH VDVVKLLLTR KANIDARDRW GSTAAADAKY YGNMDVYNIL KARGAKVPKT KKTPMVVANP RHVPDYELNP QELQVRKADG
201: ISKARPLSLH FPGIYQVAKW NGTKVSVKIL DKDLYKDHDT INAFKHELTL FEKVRHPNVV QFVGAVTQNV PMMIVSEYHP KGDLGSYLQK KGRLSPSKVL
301: RFALDIARHC KPEPVIHCDL KPKNIMLDNG GLLKVAGFGL ISFEKLSSDK SKVLNHGAHI DLSNYCVAPE VYRDEIFDRS ADSYSFGVVL YEMIEGVQPF
401: HPKPPEEAVK LMCLEGRRPS FKAKTKSCPE EMRELIEECW DVKAVVRPTF SEIIVRLDRI FGQCSKQGWW KDTFKFPCQA LTSHMP

Best Arabidopsis Sequence Match ( AT2G31800.1 )
(BLAST)

001: MANVVGQLKR GISRQFSTGS LRRTLSRQFT RQASHDPRRN NMRFSFGRQS SLDPIRRSPD GSNGPQLAVP DNLDATMQLL FVACRGDVEG VQDLLDEGID
101: VNSIDLDGRT ALHIAACEGH VDVVKLLLTR KANIDARDRW GSTAAADAKY YGNMDVFNIL KARGAKVPKT KRTPMVVANP REVPEYELNP QELQVRKADG
201: ISKGIYQVAK WNGTKVSVKI LDKDLYKDSD TINAFKHELT LFEKVRHPNV VQFVGAVTQN VPMMIVSEYH PKGDLGSYLQ KKGRLSPAKV LRFALDIARG
301: MNYLHECKPE PVIHCDLKPK NIMLDSGGHL KVAGFGLISF AKLSSDKSKI LNHGAHIDPS NYCMAPEVYK DEIFDRSVDS YSFGVVLYEM IEGVQPFHPK
401: PPEEAVKLMC LEGRRPSFKA KSKSCPQEMR ELIEECWDTE TFVRPTFSEI IVRLDKIFVH CSKQGWWKDT FKFPWK

Arabidopsis Description

At2g31800 [Source:UniProtKB/TrEMBL;Acc:Q1JPN7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.