CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67815	Canola	plastid	99.16	99.16
AT3G59830.1	Thale cress	plastid	91.18	90.99
CDX71872	Canola	cytosol, plastid	91.39	90.81
CDY05975	Canola	nucleus, plastid	90.97	90.4
CDY19106	Canola	mitochondrion	47.9	75.75
CDY15368	Canola	mitochondrion	28.36	74.59
CDX79441	Canola	mitochondrion	71.64	70.16
CDX84758	Canola	mitochondrion	71.64	70.16
CDY15369	Canola	cytosol	43.28	70.07
CDY19105	Canola	cytosol	24.37	66.67
GSMUA_Achr2P11410_001	Banana	mitochondrion	66.18	65.49
GSMUA_Achr9P02480_001	Banana	cytosol	60.71	65.09
GSMUA_Achr10P...	Banana	plastid	67.86	64.73
GSMUA_Achr8P08560_001	Banana	mitochondrion	62.18	64.07
KXG30604	Sorghum	mitochondrion	61.97	60.33
Os01t0892800-02	Rice	nucleus, plastid	59.87	59.75
TraesCS6D01G201400.1	Wheat	mitochondrion	59.66	59.29
TraesCS6B01G247800.1	Wheat	mitochondrion	59.66	59.04
TraesCS6A01G218200.1	Wheat	mitochondrion	59.87	59.01
HORVU6Hr1G055820.2	Barley	mitochondrion	59.87	59.01
Os02t0608500-01	Rice	plasma membrane	60.29	57.17
KXG33869	Sorghum	mitochondrion	57.35	57.11
TraesCS3A01G400600.1	Wheat	cytosol, plastid	56.93	55.99
TraesCS3B01G433600.1	Wheat	cytosol, plastid	56.93	55.99
TraesCS3D01G395000.1	Wheat	cytosol, plastid	56.93	55.99
Zm00001d017167_P001	Maize	mitochondrion	45.8	53.69
Zm00001d042551_P003	Maize	plastid	56.72	52.53
HORVU3Hr1G090030.12	Barley	cytosol, plastid	56.51	52.44
CDY00588	Canola	mitochondrion	43.28	44.02
CDX89004	Canola	mitochondrion	43.28	44.02
CDX71924	Canola	mitochondrion	43.07	43.99
CDX99407	Canola	cytosol	42.02	43.57
CDX78907	Canola	cytosol	42.02	43.57
CDX76504	Canola	cytosol	41.18	42.7
CDY36424	Canola	cytosol	33.19	36.41
CDX98142	Canola	cytosol	32.98	36.18
CDY33786	Canola	cytosol	32.77	35.62
CDY16124	Canola	cytosol	32.77	35.62
CDY49253	Canola	cytosol	43.07	18.84
CDX71868	Canola	extracellular	11.13	13.66
CDX71869	Canola	cytosol	6.09	8.87
CDX71871	Canola	cytosol	5.88	7.93

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:A0A078EBK4	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDX98397	ProteinID:CDX98397	ProteinID:CDX98397.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00105980001	InterPro:IPR000719	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFAM:PF13857	PIRSF:PIRSF000654	PRINTS:PR00109
ScanProsite:PS00109	PFscan:PS50011	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF4
InterPro:Prot_kinase_dom	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Tyr_kinase_AS
UniParc:UPI0004EED9A5	:	:	:	:	:

Description

BnaC06g17580D

Coordinates

chrLK031904:-:1087034..1090054

Molecular Weight (calculated)

54086.2 Da

IEP (calculated)

9.334

GRAVY (calculated)

-0.474

Length

476 amino acids

Sequence
(BLAST)

001: MENVAAQLKR GISRQFSTGS MRRTLSRQFT RQSSLDPRRN NMRFSFGRQS SLDPIRRSPE SLGCEPKMSV PENLDSTMQL LFMASKGDVG GVEELLDEGI
101: DVNSIDLDGR TALHIASCEG HYGVVKVLLS RRANIDARDR WGSTAAVDAK YYGNTEVYNL LKARGAKAPK TRKTPMTVGN PKEVPEYELN PLELQVRKVD
201: GISKGTYQVA KWNETRVSVK IFDKDSYSDP ERVNAFNHEL TLLAKARHPN IVQFVGAVTQ NLPMMIVVEH NPKGDLSGYL QKKGRLSPSK ALRFALDIAR
301: GMNYLHECKP DPFIHCDLRP KNILLDRGGQ LKICGFGLVK LSKISEDNFK VVKHEAHIDK SNYYVAPEIY KNNIFDKRVD VHSFGVILYE MTEGVSIFHP
401: KPPEEIAELI CMEGRRPTIK TKSKSYPPEL KELIEECWHP DISVRPTFSE IICRLEIIVL NCSKQGWWKD TFKFPW

Best Arabidopsis Sequence Match ( AT3G59830.1 )
(BLAST)

001: MDNIAAQLKR GISRQFSTGS MRRTLSRQFT RQNSLDPRRN NMRFSFGRQS SLDPIRRSPE SLSCEPHMSV PENLDSTMQL LFMASKGDVN GVEELLNEGI
101: DVNSIDLDGR TALHIASCEG HYDVVKVLLS RRANIDARDR WGSTAAVDAK YYGNVEVYNL LKARGAKAPK TRKTPMTVGN PKEVPEYELN PLELQVRKVD
201: GISKGTYQVA KWNGTRVSVK IFDKDSYSDP ERVNAFTNEL TLLAKARHPN IVQFVGAVTQ NLPMMIVVEC NPKGDLSVYL QKKGRLSPSK ALRFALDIAR
301: GMNYLHECKP DPIIHCELMP KNILLDRGGQ LKISGFGLIK LSKIGEDSAK VVNHEAQIDK SNYYIAPEIY KDEVFDKRAD VHSFGVILYE LTEGVSLFHP
401: KPPEEVAESI CIEGKRPTIR TKSKSYPPEL KELIEECWHP EISVRPIFSE IIIRLDKIVT NCSKQGWWKD TFKFPWK

Arabidopsis Description

Integrin-linked protein kinase family [Source:UniProtKB/TrEMBL;Acc:F4J9G8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.