CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00588	Canola	mitochondrion	92.92	92.52
CDX89004	Canola	mitochondrion	92.06	91.67
AT3G58760.3	Thale cress	golgi, plasma membrane, plastid	87.98	76.78
CDX99407	Canola	cytosol	57.94	58.82
CDX78907	Canola	cytosol	57.73	58.61
CDX76504	Canola	cytosol	56.65	57.52
CDY15369	Canola	cytosol	29.18	46.26
CDY19105	Canola	cytosol	16.52	44.25
CDY19106	Canola	mitochondrion	28.54	44.19
CDX67815	Canola	plastid	44.21	43.28
CDX71872	Canola	cytosol, plastid	44.42	43.22
CDX98397	Canola	plastid	43.99	43.07
CDY05975	Canola	nucleus, plastid	43.99	42.8
CDY36424	Canola	cytosol	39.27	42.17
CDX98142	Canola	cytosol	39.06	41.94
CDX84758	Canola	mitochondrion	43.35	41.56
CDX79441	Canola	mitochondrion	43.35	41.56
CDY16124	Canola	cytosol	39.06	41.55
CDY33786	Canola	cytosol	39.06	41.55
CDY49253	Canola	cytosol	97.0	41.54
CDY15368	Canola	mitochondrion	14.59	37.57
CDX71868	Canola	extracellular	10.94	13.14
CDX71869	Canola	cytosol	2.36	3.36
CDX71871	Canola	cytosol	2.36	3.12

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	MapMan:18.4.1.30	GO:A0A078C6Y0	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDX71924	ProteinID:CDX71924	ProteinID:CDX71924.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00155675001	InterPro:IPR000719	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFAM:PF12796	PIRSF:PIRSF000654	PFscan:PS50011	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF7	InterPro:Prot_kinase_dom	SMART:SM00248	SUPFAM:SSF48403
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI0004EE320D	SEG:seg	:	:

Description

BnaC08g29500D

Coordinates

chrLK031795:-:1324175..1327358

Molecular Weight (calculated)

52992.6 Da

IEP (calculated)

7.693

GRAVY (calculated)

-0.446

Length

466 amino acids

Sequence
(BLAST)

001: MTTTKPKSPA RFKLGRQSSL APESRTPTET VTEDEEEELA ASAGIVDPTI RLMYLANEGD IDGITKMLDS GTNVDYRDID GRTALHVAAC QGRTDVVQLL
101: LSRGAKVNSM DRWGSTPLAD AVYYKNRDVI QLLEKHGAKP TIPPMHVLTD REVPEYEIHP TELDLSNSVK ISKGTFHKTS WRGIDVAVKT FGEEMFSDEN
201: KVNAFRDEIQ LLQKIRHPNV VQFLGAVTQS HPMMIVTEYL PKGDLRQYLD RKGALMPAQA VKFALEIARG MNYLHEHKPE AIIHCDLEPP NILRDNSGHL
301: KVADFGVSKL LVVKKTVKKD RPITSLDSSL RYMAPEVYRN EEYDTKVDVF SFALILQEMI EGYVPFHLKE ETEVPKAYVE GERPPFNALA KSYPFGLREL
401: IQECWDNEAS KRPTFREIIS VLELISDRIA RKTSWKVRLG RCLPRIRLFT KRDYVNPSSY RSSITR

Best Arabidopsis Sequence Match ( AT3G58760.1 )
(BLAST)

001: MTIKPKSPAR FKLGRQSSLA PESRTPIDTL TEDEDDDLAA AATAGIGDPT IRLMYLANEG DIDGINKMLD SGTNVDYRDI DARTALHVAA CQGRTDVVEL
101: LLSRGAKVDT KDRWGSTPLA DAVYYKNHDV IKLLEKHGAK PTIAPMHVLT DKEVPEYEIH PTELDFSNSV KISKGTFNKA SWRGIDVAVK TFGEEMFTDE
201: DKVNAFRDEL ALLQKIRHPN VVQFLGAVTQ STPMMIVTEY LPKGDLRQYL DRKGPLMPAH AVKFALEIAR GMNYLHEHKP EAIIHCDLEP PNILRDDSGH
301: LKVADFGVSK LLVVKKTVKK DRPVVTCLDS SWRYMAPEVY RNEEYDTKVD VFSFALILQE MIEGCEPFHE IEDREVPKAY IEDERPPFNA PTKSYPFGLQ
401: ELIQDCWDKE ASKRPTFRVI ISTLELISDR IARKRSWKVM LGRCLPRFRL FTKRDYVNPG GSNRSSGSFN R

Arabidopsis Description

Integrin-linked protein kinase family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMD5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.