CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19106	Canola	mitochondrion	92.82	55.81
Bra021744.1-P	Field mustard	mitochondrion	93.37	37.47
AT2G31800.1	Thale cress	mitochondrion	88.95	33.82
CDX84758	Canola	mitochondrion	89.5	33.33
CDX79441	Canola	mitochondrion	89.5	33.33
KRH43026	Soybean	nucleus	76.24	29.05
KRH59134	Soybean	plastid	75.69	28.84
VIT_05s0094g01080.t01	Wine grape	plastid	75.14	28.81
CDX67815	Canola	plastid	75.14	28.57
CDX98397	Canola	plastid	74.59	28.36
PGSC0003DMT400064944	Potato	mitochondrion, plastid	73.48	28.18
Solyc08g014450.2.1	Tomato	mitochondrion	73.48	28.18
CDX71872	Canola	cytosol, plastid	73.48	27.77
CDY05975	Canola	nucleus, plastid	73.48	27.77
Solyc12g019410.1.1	Tomato	plastid	69.61	26.87
PGSC0003DMT400052486	Potato	nucleus, plastid	67.96	26.23
GSMUA_Achr2P11410_001	Banana	mitochondrion	66.85	25.16
Os01t0892800-02	Rice	nucleus, plastid	60.77	23.06
GSMUA_Achr10P...	Banana	plastid	62.43	22.65
KXG30604	Sorghum	mitochondrion	60.77	22.49
KXG33869	Sorghum	mitochondrion	58.56	22.18
Os02t0608500-01	Rice	plasma membrane	59.67	21.51
TraesCS6D01G201400.1	Wheat	mitochondrion	56.91	21.5
TraesCS6A01G218200.1	Wheat	mitochondrion	56.91	21.33
TraesCS6B01G247800.1	Wheat	mitochondrion	56.35	21.21
HORVU6Hr1G055820.2	Barley	mitochondrion	56.35	21.12
GSMUA_Achr9P02480_001	Banana	cytosol	51.38	20.95
TraesCS3B01G433600.1	Wheat	cytosol, plastid	55.8	20.87
TraesCS3D01G395000.1	Wheat	cytosol, plastid	55.25	20.66
TraesCS3A01G400600.1	Wheat	cytosol, plastid	54.7	20.45
Zm00001d042551_P003	Maize	plastid	58.01	20.43
GSMUA_Achr8P08560_001	Banana	mitochondrion	50.83	19.91
HORVU3Hr1G090030.12	Barley	cytosol, plastid	54.7	19.3
CDX89004	Canola	mitochondrion	38.12	14.74
CDY00588	Canola	mitochondrion	38.12	14.74
CDX78907	Canola	cytosol	37.02	14.6
CDX99407	Canola	cytosol	37.02	14.6
CDX71924	Canola	mitochondrion	37.57	14.59
CDX76504	Canola	cytosol	34.25	13.51
Zm00001d017167_P001	Maize	mitochondrion	29.28	13.05
CDX98142	Canola	cytosol	21.55	8.99
CDY36424	Canola	cytosol	21.55	8.99
CDY16124	Canola	cytosol	21.55	8.9
CDY33786	Canola	cytosol	20.44	8.45
CDX71869	Canola	cytosol	13.26	7.34
CDX71871	Canola	cytosol	12.71	6.52
CDY49253	Canola	cytosol	37.02	6.16
CDX71868	Canola	extracellular	12.71	5.93
CDY15369	Canola	cytosol	2.76	1.7
CDY19105	Canola	cytosol	0.55	0.57
KRH18929	Soybean	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	UniProt:A0A078FST6	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
EnsemblPlants:CDY15368	ProteinID:CDY15368	ProteinID:CDY15368.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSBRNA2T00085662001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF12796	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF4	SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI0004EE90E1

Description

BnaC04g42550DBnaC04g42550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FST6]

Coordinates

chrLK032054:+:380301..381169

Molecular Weight (calculated)

20109.9 Da

IEP (calculated)

9.874

GRAVY (calculated)

-0.480

Length

181 amino acids

Sequence
(BLAST)

001: MANIAGHLKR GISRQFSSAS LRRTLSRQFT RQSSHDPRRN NMRFSFGRQS SLDPIRRSST PEEGSNRPPH QLAVPDNLDA TMQLLFVACG GDVEGVRDLL
101: DEGIDVNSID LDGRTALHIA ACEGHVDVVK LLLTRKANID ARDRWGSTAA ADAKYYGNMD VYNILKARGA KVPPRILNCF Y

Best Arabidopsis Sequence Match ( AT2G31800.1 )
(BLAST)

001: MANVVGQLKR GISRQFSTGS LRRTLSRQFT RQASHDPRRN NMRFSFGRQS SLDPIRRSPD GSNGPQLAVP DNLDATMQLL FVACRGDVEG VQDLLDEGID
101: VNSIDLDGRT ALHIAACEGH VDVVKLLLTR KANIDARDRW GSTAAADAKY YGNMDVFNIL KARGAKVPKT KRTPMVVANP REVPEYELNP QELQVRKADG
201: ISKGIYQVAK WNGTKVSVKI LDKDLYKDSD TINAFKHELT LFEKVRHPNV VQFVGAVTQN VPMMIVSEYH PKGDLGSYLQ KKGRLSPAKV LRFALDIARG
301: MNYLHECKPE PVIHCDLKPK NIMLDSGGHL KVAGFGLISF AKLSSDKSKI LNHGAHIDPS NYCMAPEVYK DEIFDRSVDS YSFGVVLYEM IEGVQPFHPK
401: PPEEAVKLMC LEGRRPSFKA KSKSCPQEMR ELIEECWDTE TFVRPTFSEI IVRLDKIFVH CSKQGWWKDT FKFPWK

Arabidopsis Description

At2g31800 [Source:UniProtKB/TrEMBL;Acc:Q1JPN7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.