CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX71871	Canola	cytosol	97.25	90.08
CDY15368	Canola	mitochondrion	7.34	13.26
CDY19106	Canola	mitochondrion	6.73	7.31
CDX67815	Canola	plastid	8.87	6.09
CDX98397	Canola	plastid	8.87	6.09
CDX71872	Canola	cytosol, plastid	8.87	6.05
CDY05975	Canola	nucleus, plastid	8.56	5.85
CDX79441	Canola	mitochondrion	8.26	5.56
CDX84758	Canola	mitochondrion	8.26	5.56
CDX71868	Canola	extracellular	3.06	2.58
CDX71924	Canola	mitochondrion	3.36	2.36
CDX89004	Canola	mitochondrion	3.36	2.35
CDY00588	Canola	mitochondrion	3.36	2.35
CDX99407	Canola	cytosol	2.75	1.96
CDX78907	Canola	cytosol	2.75	1.96
CDX98142	Canola	cytosol	2.45	1.84
CDY36424	Canola	cytosol	2.45	1.84
CDX76504	Canola	cytosol	2.45	1.74
CDY19105	Canola	cytosol	0.92	1.72
CDY16124	Canola	cytosol	2.14	1.6
CDY33786	Canola	cytosol	2.14	1.6
CDY15369	Canola	cytosol	0.92	1.02
CDY49253	Canola	cytosol	3.36	1.01

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	GO:A0A078C6S6	InterPro:ADH_C	EnsemblPlants:CDX71869
ProteinID:CDX71869	ProteinID:CDX71869.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00155603001	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107
PFAM:PF16884	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF9	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI0004EEDFBA	SEG:seg	:	:	:

Description

BnaC08g30050D

Coordinates

chrLK031795:+:941391..942964

Molecular Weight (calculated)

35990.6 Da

IEP (calculated)

4.551

GRAVY (calculated)

0.092

Length

327 amino acids

Sequence
(BLAST)

001: METTVRNKQV ILKHYVNGFP EESDLMIVTA PDTMELKVKP GSSTILLKNL FLSCDPYMGT FMRESDSGSS EVAVETLSLL DAFIPGKPIA GVGVSEVIDS
101: DDPCFAKGDF VWGIVDWEEY SVTGLTAYAG FFEICSPKKG EAVFVSAAAG AVGQLVGQFA KLMGCYVVGS AGSKQKVDLL LNKFGFDDAF NYKEEPDLDA
201: ALKRCLPQGI DIYFENVGGK MLDSVLMNMK AHERIAVCGM ISQYHTETEE GIQNLPVVVY KRIKMQGFLA FDFIDRFPKY LEFVLPYINE RKLVYVEDIV
301: EGLENGPAAL VGLFRGQNVG KQVLKIA

Best Arabidopsis Sequence Match ( AT3G59845.1 )
(BLAST)

001: METTVKNKQV ILRNYVKGIP KESDLMIITA SDPVELKVKP GSAAVMVRNL YLSCDPYMGI LMREPTPSTL ALLDAFIPGK PIAGIGVSQV IDSDDPSFTK
101: GDMIWGIVNW EEFSTINPAA IFKIDVNINV PLSYYTGILG MIGLTAYAGF FEICSPKKGD TVFVSAASGA VGQLVGQFAK LMGCYVVGSA GSKQKVDLLL
201: NKFGYDDAFN YKEEPDLDSA LKRCVPKGID IYFENVGGKM LDAVLLNMKT YGRIAVCGMI SQYHLETRDR LQNLPDIIFK KIRMQGFASY DFIDRFPKFL
301: EFVLPYIKEE KLAYVEDIVE GLENGPAALV GLLHGKNVGK QVLKVA

Arabidopsis Description

Allyl alcohol dehydrogenase-like protein [Source:UniProtKB/TrEMBL;Acc:Q8LPM0]
SUBAcon: [peroxisome,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.