CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05975	Canola	nucleus, plastid	99.16	99.16
CDX67815	Canola	plastid	91.23	91.81
CDX98397	Canola	plastid	90.81	91.39
AT3G59830.1	Thale cress	plastid	89.14	89.52
CDY19106	Canola	mitochondrion	47.18	75.08
CDY15368	Canola	mitochondrion	27.77	73.48
CDY15369	Canola	cytosol	43.01	70.07
CDX79441	Canola	mitochondrion	70.98	69.96
CDX84758	Canola	mitochondrion	70.98	69.96
GSMUA_Achr9P02480_001	Banana	cytosol	61.59	66.44
GSMUA_Achr2P11410_001	Banana	mitochondrion	66.39	66.11
CDY19105	Canola	cytosol	23.8	65.52
GSMUA_Achr8P08560_001	Banana	mitochondrion	62.0	64.29
GSMUA_Achr10P...	Banana	plastid	66.6	63.93
KXG30604	Sorghum	mitochondrion	62.84	61.55
Os01t0892800-02	Rice	nucleus, plastid	60.96	61.22
TraesCS6D01G201400.1	Wheat	mitochondrion	59.5	59.5
TraesCS6B01G247800.1	Wheat	mitochondrion	59.5	59.25
TraesCS6A01G218200.1	Wheat	mitochondrion	59.71	59.21
HORVU6Hr1G055820.2	Barley	mitochondrion	59.5	59.01
KXG33869	Sorghum	mitochondrion	58.46	58.58
Os02t0608500-01	Rice	plasma membrane	60.33	57.57
TraesCS3B01G433600.1	Wheat	cytosol, plastid	58.04	57.44
TraesCS3A01G400600.1	Wheat	cytosol, plastid	57.83	57.23
TraesCS3D01G395000.1	Wheat	cytosol, plastid	57.83	57.23
Zm00001d017167_P001	Maize	mitochondrion	46.35	54.68
Zm00001d042551_P003	Maize	plastid	58.25	54.28
HORVU3Hr1G090030.12	Barley	cytosol, plastid	57.62	53.8
CDX71924	Canola	mitochondrion	43.22	44.42
CDY00588	Canola	mitochondrion	43.01	44.02
CDX89004	Canola	mitochondrion	43.01	44.02
CDX99407	Canola	cytosol	42.17	44.01
CDX78907	Canola	cytosol	42.17	44.01
CDX76504	Canola	cytosol	41.13	42.92
CDY36424	Canola	cytosol	33.61	37.1
CDX98142	Canola	cytosol	33.4	36.87
CDY33786	Canola	cytosol	33.19	36.3
CDY16124	Canola	cytosol	33.19	36.3
CDY49253	Canola	cytosol	43.22	19.03
CDX71868	Canola	extracellular	11.69	14.43
CDX71869	Canola	cytosol	6.05	8.87
CDX71871	Canola	cytosol	5.85	7.93

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:A0A078C4M6	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDX71872	ProteinID:CDX71872	ProteinID:CDX71872.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00155607001	InterPro:IPR000719	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFAM:PF12796	PIRSF:PIRSF000654
PRINTS:PR00109	ScanProsite:PS00109	PFscan:PS50011	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44023
PANTHER:PTHR44023:SF4	InterPro:Prot_kinase_dom	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Tyr_kinase_AS	UniParc:UPI0004EE55EB	:	:	:	:

Description

BnaC08g30020D

Coordinates

chrLK031795:+:952760..955191

Molecular Weight (calculated)

54044.7 Da

IEP (calculated)

8.828

GRAVY (calculated)

-0.495

Length

479 amino acids

Sequence
(BLAST)

001: MENVAEQLKR GISRQSSTGS VRRGTLSRQF TRQSSLDPRR NNMRFSFGRQ SSLDPIRRSP ESLSSCQPQM MSVPENLDST MQLLFMASKG DVDGVEELLD
101: EGVDVNSIDL DGRTALHIAS CEGHYDVVRV LLSRRANIDA RDRWGSTAAV DAKYYGNVEV FNLLKTRGAK PPKTRKTPMT VGNPKEVPEY ELNPLELQVR
201: KADGISKGTY QVAKWNGTRV SVKISDKDSY SDPERVNAFN HELTVLAKAR HPNIVQFVGA VTQNLPMMIV VEHNPKGDLS EYLQKKGRLS PSKALRFALD
301: IARGMNYLHE CKPDPVIHCD LRPKNILLDR GGQLKISGFG LIKLSKVSED NVKVVNHEAH IDKSNCYIAP ELYKNIIFDK SVDVHSFGVI LYEMTEGVSI
401: FHPKSPEEVA ESICMEGRRP TIKTKSKGYP SELKELIEEC WHPDTSVRPI FSEIIIRLDN IVANCSKQGW WKDTFKFPW

Best Arabidopsis Sequence Match ( AT3G59830.1 )
(BLAST)

001: MDNIAAQLKR GISRQFSTGS MRRTLSRQFT RQNSLDPRRN NMRFSFGRQS SLDPIRRSPE SLSCEPHMSV PENLDSTMQL LFMASKGDVN GVEELLNEGI
101: DVNSIDLDGR TALHIASCEG HYDVVKVLLS RRANIDARDR WGSTAAVDAK YYGNVEVYNL LKARGAKAPK TRKTPMTVGN PKEVPEYELN PLELQVRKVD
201: GISKGTYQVA KWNGTRVSVK IFDKDSYSDP ERVNAFTNEL TLLAKARHPN IVQFVGAVTQ NLPMMIVVEC NPKGDLSVYL QKKGRLSPSK ALRFALDIAR
301: GMNYLHECKP DPIIHCELMP KNILLDRGGQ LKISGFGLIK LSKIGEDSAK VVNHEAQIDK SNYYIAPEIY KDEVFDKRAD VHSFGVILYE LTEGVSLFHP
401: KPPEEVAESI CIEGKRPTIR TKSKSYPPEL KELIEECWHP EISVRPIFSE IIIRLDKIVT NCSKQGWWKD TFKFPWK

Arabidopsis Description

Integrin-linked protein kinase family [Source:UniProtKB/TrEMBL;Acc:F4J9G8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.