Factsheet for TraesCS6B01G247800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G218200.1	Wheat	mitochondrion	98.34	97.93
TraesCS6D01G201400.1	Wheat	mitochondrion	96.88	97.29
HORVU6Hr1G055820.2	Barley	mitochondrion	96.88	96.48
KXG30604	Sorghum	mitochondrion	84.41	83.03
Os02t0608500-01	Rice	plasma membrane	83.37	79.88
Zm00001d017167_P001	Maize	mitochondrion	63.41	75.12
VIT_05s0094g01080.t01	Wine grape	plastid	64.24	65.47
KRH18929	Soybean	cytosol	8.94	64.18
KRH43026	Soybean	nucleus	62.79	63.58
KRH59134	Soybean	plastid	62.37	63.16
GSMUA_Achr9P02480_001	Banana	cytosol	58.0	62.84
CDY19106	Canola	mitochondrion	39.29	62.79
Bra022866.1-P	Field mustard	mitochondrion	57.38	61.88
AT2G31800.1	Thale cress	mitochondrion	61.12	61.76
Solyc08g014450.2.1	Tomato	mitochondrion	60.5	61.65
PGSC0003DMT400064944	Potato	mitochondrion, plastid	60.5	61.65
CDY15369	Canola	cytosol	37.63	61.56
GSMUA_Achr2P11410_001	Banana	mitochondrion	61.12	61.12
Solyc12g019410.1.1	Tomato	plastid	59.46	60.98
PGSC0003DMT400052486	Potato	nucleus, plastid	59.04	60.55
Bra021744.1-P	Field mustard	mitochondrion	56.76	60.53
AT2G43850.1	Thale cress	plastid	59.46	59.71
CDX98397	Canola	plastid	59.04	59.66
CDX71872	Canola	cytosol, plastid	59.25	59.5
CDY05975	Canola	nucleus, plastid	59.25	59.5
Bra007480.1-P	Field mustard	nucleus, plastid	59.25	59.5
CDX67815	Canola	plastid	58.84	59.45
Bra003392.1-P	Field mustard	plastid	58.84	59.33
CDX79441	Canola	mitochondrion	59.88	59.26
CDX84758	Canola	mitochondrion	59.88	59.26
AT3G59830.1	Thale cress	plastid	58.42	58.91
CDY19105	Canola	cytosol	20.58	56.9
CDY15368	Canola	mitochondrion	21.21	56.35
TraesCS3B01G433600.1	Wheat	cytosol, plastid	54.26	53.93
TraesCS3B01G306500.1	Wheat	nucleus	40.12	40.89
TraesCS2B01G180500.1	Wheat	cytosol	32.85	34.96

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	MapMan:18.4.1.30	Gene3D:3.30.200.20	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFAM:PF12796	PIRSF:PIRSF000654
PRINTS:PR00109	PFscan:PS50011	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF4
InterPro:Prot_kinase_dom	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	EnsemblPlantsGene:TraesCS6B01G247800
EnsemblPlants:TraesCS6B01G247800.1	TIGR:cd00204	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6B:-:444538637..444542796

Molecular Weight (calculated)

53582.0 Da

IEP (calculated)

8.518

GRAVY (calculated)

-0.396

Length

481 amino acids

Sequence
(BLAST)

001: MAAAAKLTRS FSRQLSSGAA RVWRQLSLEP HTPRRGAAAA TGAVAAAGPT RFGLARQSSL DPTPAPDDGA VLAMPENLDA TMRLLYAACQ GDAAGVEELL
101: REGVDVDSID FDGRTALHIT ACEGRGEVVR LLLGWKANIN ARDRWGSTPA ADAKHYGHFE VYNLLRARGA KLPKTKKTPM TVSNPKEVPE YELNPLELEF
201: RRGEEVTKGY YVAKWYGSKV FVKILDKDSF SDGDSIEAFK HELTLLEKAR HPNLVQFVGA VTQNVPLMIV SEYHQKGDLA SYLETKGRVQ SYKAIRFALD
301: IARGLNYLHE CKPEPIIHGD LSPKNIVRDD EGKLKVAGFG SLDLTKVSQD KLQMVQPVSN FDSVYIAPEM YRNEAFDRSV DTFAFGLILY EMIEGSPAFH
401: PKPQEEAAKM ICSEGLRPLF KNKPKSYPEG VKELIQECWD PTPSVRPTFS DIIVRLNKIS ASCSKQTRWR DNFKLPWYSS R

Best Arabidopsis Sequence Match ( AT2G31800.1 )
(BLAST)

001: MANVVGQLKR GISRQFSTGS LRRTLSRQFT RQASHDPRRN NMRFSFGRQS SLDPIRRSPD GSNGPQLAVP DNLDATMQLL FVACRGDVEG VQDLLDEGID
101: VNSIDLDGRT ALHIAACEGH VDVVKLLLTR KANIDARDRW GSTAAADAKY YGNMDVFNIL KARGAKVPKT KRTPMVVANP REVPEYELNP QELQVRKADG
201: ISKGIYQVAK WNGTKVSVKI LDKDLYKDSD TINAFKHELT LFEKVRHPNV VQFVGAVTQN VPMMIVSEYH PKGDLGSYLQ KKGRLSPAKV LRFALDIARG
301: MNYLHECKPE PVIHCDLKPK NIMLDSGGHL KVAGFGLISF AKLSSDKSKI LNHGAHIDPS NYCMAPEVYK DEIFDRSVDS YSFGVVLYEM IEGVQPFHPK
401: PPEEAVKLMC LEGRRPSFKA KSKSCPQEMR ELIEECWDTE TFVRPTFSEI IVRLDKIFVH CSKQGWWKDT FKFPWK

Arabidopsis Description

At2g31800 [Source:UniProtKB/TrEMBL;Acc:Q1JPN7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.