CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59134	Soybean	plastid	96.42	96.42
KRH18929	Soybean	cytosol	12.84	91.04
VIT_05s0094g01080.t01	Wine grape	plastid	81.05	81.57
CDY19106	Canola	mitochondrion	50.74	80.07
PGSC0003DMT400052486	Potato	nucleus, plastid	77.05	78.04
AT2G31800.1	Thale cress	mitochondrion	77.47	77.31
Solyc08g014450.2.1	Tomato	mitochondrion	76.63	77.12
Solyc12g019410.1.1	Tomato	plastid	76.0	76.97
PGSC0003DMT400064944	Potato	mitochondrion, plastid	76.42	76.91
CDY15369	Canola	cytosol	47.37	76.53
Bra021744.1-P	Field mustard	mitochondrion	72.63	76.5
CDY15368	Canola	mitochondrion	29.05	76.24
Bra022866.1-P	Field mustard	mitochondrion	71.37	76.01
CDX79441	Canola	mitochondrion	75.58	73.87
CDX84758	Canola	mitochondrion	75.58	73.87
CDY19105	Canola	cytosol	25.89	70.69
GSMUA_Achr2P11410_001	Banana	mitochondrion	68.63	67.78
GSMUA_Achr10P...	Banana	plastid	70.53	67.13
GSMUA_Achr8P08560_001	Banana	mitochondrion	64.42	66.23
GSMUA_Achr9P02480_001	Banana	cytosol	61.05	65.32
KXG30604	Sorghum	mitochondrion	65.89	64.01
TraesCS6D01G201400.1	Wheat	mitochondrion	63.58	63.05
TraesCS6B01G247800.1	Wheat	mitochondrion	63.58	62.79
TraesCS6A01G218200.1	Wheat	mitochondrion	63.79	62.73
HORVU6Hr1G055820.2	Barley	mitochondrion	63.58	62.53
Os01t0892800-02	Rice	nucleus, plastid	62.74	62.47
Os02t0608500-01	Rice	plasma membrane	62.95	59.56
TraesCS3D01G395000.1	Wheat	cytosol, plastid	60.42	59.3
TraesCS3B01G433600.1	Wheat	cytosol, plastid	60.42	59.3
TraesCS3A01G400600.1	Wheat	cytosol, plastid	60.21	59.09
KXG33869	Sorghum	mitochondrion	58.74	58.37
Zm00001d017167_P001	Maize	mitochondrion	48.63	56.9
HORVU3Hr1G090030.12	Barley	cytosol, plastid	59.16	54.78
Zm00001d042551_P003	Maize	plastid	57.68	53.31
KRH73700	Soybean	cytosol	45.05	47.14
KRH14455	Soybean	cytosol, mitochondrion	44.21	46.36
KRH21151	Soybean	nucleus	42.74	44.62
KRH11091	Soybean	nucleus	42.53	44.3
KRH74933	Soybean	cytosol	33.47	37.24
KRH50554	Soybean	cytosol, nucleus	32.63	36.82
KRG89553	Soybean	nucleus	32.63	36.64

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	EntrezGene:100784109	MapMan:18.4.1.30	Gene3D:3.30.200.20	EMBL:ACUP02004841
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:GLYMA_08G126000	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	UniProt:I1KSP8	InterPro:IPR000719	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	EnsemblPlants:KRH43026	ProteinID:KRH43026	ProteinID:KRH43026.1	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PFAM:PF12796	PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF4	InterPro:Prot_kinase_dom	SMART:SM00220
SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001BA85EC

Description

hypothetical protein

Coordinates

chr8:-:9695425..9700883

Molecular Weight (calculated)

53711.7 Da

IEP (calculated)

9.314

GRAVY (calculated)

-0.458

Length

475 amino acids

Sequence
(BLAST)

001: MESIAAQLKR GISRQFSSGS LRRNLSRQFT RQASLDPRRN NQRFSIGRQS SLDPIRRSPG PVQPELTVPE NLDSTMQLLF MACRGDAKGV DDLLNEGIDV
101: NSIDLDGRTA LHVAACEGHV EVARLLLTRK ANLDARDRWG STAAADAKYY GNTEIYYMLK ARGAKVPKTR KTPMTVANPR EVPEYELNPL ELQVRKSDGI
201: SKGTYQVAKW NGTKVAVKIL DKDSYSDPDT INAFKHELTL LERVRHPNVV QFVGAVTQNI PMMIVREYHS KGDLASYLQK KGRLSPSKVL RFCHDIARGM
301: NYLHECKPDP VIHCDLKPKN ILLDSGGQLK IAGFGTVRFS LISPDEAQLV QPEPNIDLSS LYVAPEIYKD EVFDRSVDAY SFGLILYEMI EGTQPFHPKS
401: SEEAVRLMCL EGKRPAFKIK TKHYPPELKE LIEECWDPTP VVRPTFSQVI VRLDKIVANC SKQGWWKDTF KLPWK

Best Arabidopsis Sequence Match ( AT2G31800.1 )
(BLAST)

001: MANVVGQLKR GISRQFSTGS LRRTLSRQFT RQASHDPRRN NMRFSFGRQS SLDPIRRSPD GSNGPQLAVP DNLDATMQLL FVACRGDVEG VQDLLDEGID
101: VNSIDLDGRT ALHIAACEGH VDVVKLLLTR KANIDARDRW GSTAAADAKY YGNMDVFNIL KARGAKVPKT KRTPMVVANP REVPEYELNP QELQVRKADG
201: ISKGIYQVAK WNGTKVSVKI LDKDLYKDSD TINAFKHELT LFEKVRHPNV VQFVGAVTQN VPMMIVSEYH PKGDLGSYLQ KKGRLSPAKV LRFALDIARG
301: MNYLHECKPE PVIHCDLKPK NIMLDSGGHL KVAGFGLISF AKLSSDKSKI LNHGAHIDPS NYCMAPEVYK DEIFDRSVDS YSFGVVLYEM IEGVQPFHPK
401: PPEEAVKLMC LEGRRPSFKA KSKSCPQEMR ELIEECWDTE TFVRPTFSEI IVRLDKIFVH CSKQGWWKDT FKFPWK

Arabidopsis Description

At2g31800 [Source:UniProtKB/TrEMBL;Acc:Q1JPN7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.