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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI

Inferred distinct locusB in Crop

locusBlocations
KRH42483
KRH58580

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G14000.1 KRH42483 AT2G01950.1 19000166
AT1G14000.1 KRH58580 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG89553 Soybean nucleus 98.34 97.87
KRH74933 Soybean cytosol 86.94 85.71
VIT_01s0182g00020.t01 Wine grape cytosol 84.32 81.61
CDY36424 Canola cytosol 83.37 80.88
PGSC0003DMT400072865 Potato cytosol 83.37 80.69
CDX98142 Canola cytosol 83.14 80.65
Solyc05g013070.2.1 Tomato cytosol 83.37 80.5
CDY33786 Canola cytosol 83.61 80.37
CDY16124 Canola cytosol 83.37 80.14
AT1G14000.1 Thale cress cytosol 82.9 79.68
Solyc01g010950.2.1 Tomato extracellular 80.52 78.84
Os07t0632800-01 Rice plasma membrane 73.63 77.89
Bra026867.1-P Field mustard cytosol 83.37 77.14
GSMUA_Achr8P16850_001 Banana cytosol 60.57 75.89
GSMUA_Achr6P10820_001 Banana cytosol 79.1 72.55
EER99756 Sorghum cytosol 74.35 70.81
Zm00001d022239_P001 Maize cytosol, extracellular 73.63 70.45
TraesCS2A01G155500.1 Wheat cytosol 74.11 70.43
TraesCS2D01G161300.1 Wheat cytosol 74.58 69.47
TraesCS2B01G180500.1 Wheat cytosol 74.35 69.25
HORVU2Hr1G028230.14 Barley cytosol 74.35 68.94
Bra019692.1-P Field mustard nucleus 79.81 61.09
KRH73700 Soybean cytosol 43.71 40.53
KRH21151 Soybean nucleus 43.71 40.44
KRH11091 Soybean nucleus 43.23 39.91
KRH14455 Soybean cytosol, mitochondrion 42.52 39.51
KRH18929 Soybean cytosol 5.23 32.84
KRH43026 Soybean nucleus 36.82 32.63
KRH59134 Soybean plastid 35.87 31.79
Protein Annotations
Gene3D:1.10.510.10Gene3D:1.25.40.20EntrezGene:100815995MapMan:18.4.1.30Gene3D:3.30.200.20EMBL:ACUP02004705
InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sfEnsemblPlantsGene:GLYMA_07G228000GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0004871GO:GO:0005488GO:GO:0005515
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006464
GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009719
GO:GO:0009734GO:GO:0009742GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
GO:GO:0035556UniProt:I1KMF4InterPro:IPR000719InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770
EnsemblPlants:KRH50554ProteinID:KRH50554ProteinID:KRH50554.1InterPro:Kinase-like_dom_sfPFAM:PF07714PFAM:PF13637
PIRSF:PIRSF000654PRINTS:PR00109ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50088
PFscan:PS50297PANTHER:PTHR44023PANTHER:PTHR44023:SF6InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SMART:SM00248SUPFAM:SSF48403SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASUniParc:UPI000233867D
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr7:+:40588259..40595596
Molecular Weight (calculated)
47787.0 Da
IEP (calculated)
8.169
GRAVY (calculated)
-0.507
Length
421 amino acids
Sequence
(BLAST)
001: MSSGSSHSSE KEKEKQRVSR TSLILWHAHQ NDAGSVRKLL QEDPSLVKAR DYDNRTPLHV ASLHGWIDVA TCLIEFGADV NAQDRWKNTP LADAEGAKKS
101: NVIELLQSHG GLSFGQNGSH FEPKPVAPPL PNKCDWEVEP TELDFSNSVR IGKGSFGEIL KAHWRGTPVA VKRILPSLSE DRLVIQDFRH EVNLLVKLRH
201: PNIVQFLGAV TARKPLMLIT EYLRGGDLHQ YLKEKGALSP ATAINFSMDI VRGMAYLHNE PNVIIHRDLK PRNVLLVNSS ADHLKVGDFG LSKLITVQSS
301: HDVYKMTGET GSYRYMAPEV FKHRRYDKKV DVYSFAMILY EMLEGEPPFA SREPYEGAKY AAEGHRPHFR AKGYTPELQE LTEQCWAHDM SQRPSFIEIL
401: KRLEKIKENL PTENHWHLFT S
Best Arabidopsis Sequence Match ( AT1G14000.1 )
(BLAST)
001: MSSDSPAAGD GGEQAAAGTS VPSPSYDKQK EKARVSRTSL ILWHAHQNDA AAVRKLLEED PTLVHARDYD KRTPLHVASL HGWIDVVKCL LEFGADVNAQ
101: DRWKNTPLAD AEGARKQKMI ELLKSHGGLS YGQNGSHFEP KPVPPPIPKK CDWEIEPAEL DFSNAAMIGK GSFGEIVKAY WRGTPVAVKR ILPSLSDDRL
201: VIQDFRHEVD LLVKLRHPNI VQFLGAVTER KPLMLITEYL RGGDLHQYLK EKGGLTPTTA VNFALDIARG MTYLHNEPNV IIHRDLKPRN VLLVNSSADH
301: LKVGDFGLSK LIKVQNSHDV YKMTGETGSY RYMAPEVFKH RRYDKKVDVF SFAMILYEML EGEPPFANHE PYEAAKHVSD GHRPTFRSKG CTPDLRELIV
401: KCWDADMNQR PSFLDILKRL EKIKETLPSD HHWGLFTS
Arabidopsis Description
VIKVIK [Source:UniProtKB/TrEMBL;Acc:A0A178W4T8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.