Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU3Hr1G018030.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G14000.1 | HORVU3Hr1G018030.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G155500.1 | Wheat | cytosol | 92.51 | 94.81 |
| TraesCS2D01G161300.1 | Wheat | cytosol | 93.61 | 94.03 |
| TraesCS2B01G180500.1 | Wheat | cytosol | 93.61 | 94.03 |
| Os07t0632800-01 | Rice | plasma membrane | 79.74 | 90.95 |
| EER99756 | Sorghum | cytosol | 83.26 | 85.52 |
| Zm00001d022239_P001 | Maize | cytosol, extracellular | 82.82 | 85.45 |
| VIT_01s0182g00020.t01 | Wine grape | cytosol | 72.91 | 76.09 |
| KRH74933 | Soybean | cytosol | 70.04 | 74.47 |
| KRG89553 | Soybean | nucleus | 69.38 | 74.47 |
| Solyc01g010950.2.1 | Tomato | extracellular | 70.48 | 74.42 |
| KRH50554 | Soybean | cytosol, nucleus | 68.94 | 74.35 |
| CDY36424 | Canola | cytosol | 70.93 | 74.19 |
| CDX98142 | Canola | cytosol | 70.93 | 74.19 |
| PGSC0003DMT400072865 | Potato | cytosol | 70.93 | 74.02 |
| Solyc05g013070.2.1 | Tomato | cytosol | 70.93 | 73.85 |
| AT1G14000.1 | Thale cress | cytosol | 71.15 | 73.74 |
| CDY33786 | Canola | cytosol | 71.15 | 73.74 |
| CDY16124 | Canola | cytosol | 70.93 | 73.52 |
| Bra026867.1-P | Field mustard | cytosol | 71.15 | 70.99 |
| GSMUA_Achr8P16840_001 | Banana | cytosol | 19.38 | 63.31 |
| Bra019692.1-P | Field mustard | nucleus | 67.84 | 56.0 |
| HORVU3Hr1G071430.7 | Barley | cytosol | 37.22 | 36.03 |
| HORVU6Hr1G055820.2 | Barley | mitochondrion | 35.02 | 32.92 |
| HORVU3Hr1G090030.12 | Barley | cytosol, plastid | 33.26 | 29.43 |
Protein Annotations
| Gene3D:1.10.510.10 | Gene3D:1.25.40.20 | MapMan:18.4.1.30 | Gene3D:3.30.200.20 | UniProt:A0A287HHT3 | InterPro:Ankyrin_rpt |
| InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlantsGene:HORVU2Hr1G028230 | EnsemblPlants:HORVU2Hr1G028230.14 | InterPro:IPR000719 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 |
| InterPro:Kinase-like_dom_sf | PFAM:PF07714 | PFAM:PF12796 | PIRSF:PIRSF000654 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR44023 | PANTHER:PTHR44023:SF6 | InterPro:Prot_kinase_dom |
| InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SMART:SM00248 | SUPFAM:SSF48403 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom |
| InterPro:Ser/Thr_kinase_AS | UniParc:UPI000B4856AD | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:94913515..94922967
Molecular Weight (calculated)
49458.2 Da
IEP (calculated)
8.606
GRAVY (calculated)
-0.352
Length
454 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGSEEEAAA HAAGRTGAGG GXXXXXXXXX TNLSXXXSHQ RRRFDDKSLV ARTSLILWHT HQNDAAAVRK LLDEDGTLVN ARDYDSRTPL HVAALHGWQD
101: VAECLVAKGA DVNALDRWQN TPLADAEGAK RHAMIDLLKK HGGLTFGKTG SHFEAKSIPP PLTNKADWEI NPLELDFTKA VMIGKGSFGE ILKANWRGTP
201: IAVKRILPSL SDDRLVIQDF KHEVNLLIKL RHPNIVQFLG AVTETKPLML VTEFLRGGDL HQYLKEKGSL SPLTAVNFAL DIARGMAYLH NEPNVIIHRD
301: LKPRNILLVN TAANHLKVGD FGLSKIIKSQ HANDVYKMTG ETGSYRYMAP EVFKHRKYDK KVDIFSFAMI LYEMLEGDAP FSSYEPYEAA KYVSDGHRPA
401: FRSKGHTAEL KELTEVCWAA DINLRPSFLE ILKRLEKIKE SLASHDHHWH LFSQ
101: VAECLVAKGA DVNALDRWQN TPLADAEGAK RHAMIDLLKK HGGLTFGKTG SHFEAKSIPP PLTNKADWEI NPLELDFTKA VMIGKGSFGE ILKANWRGTP
201: IAVKRILPSL SDDRLVIQDF KHEVNLLIKL RHPNIVQFLG AVTETKPLML VTEFLRGGDL HQYLKEKGSL SPLTAVNFAL DIARGMAYLH NEPNVIIHRD
301: LKPRNILLVN TAANHLKVGD FGLSKIIKSQ HANDVYKMTG ETGSYRYMAP EVFKHRKYDK KVDIFSFAMI LYEMLEGDAP FSSYEPYEAA KYVSDGHRPA
401: FRSKGHTAEL KELTEVCWAA DINLRPSFLE ILKRLEKIKE SLASHDHHWH LFSQ
001: MSSDSPAAGD GGEQAAAGTS VPSPSYDKQK EKARVSRTSL ILWHAHQNDA AAVRKLLEED PTLVHARDYD KRTPLHVASL HGWIDVVKCL LEFGADVNAQ
101: DRWKNTPLAD AEGARKQKMI ELLKSHGGLS YGQNGSHFEP KPVPPPIPKK CDWEIEPAEL DFSNAAMIGK GSFGEIVKAY WRGTPVAVKR ILPSLSDDRL
201: VIQDFRHEVD LLVKLRHPNI VQFLGAVTER KPLMLITEYL RGGDLHQYLK EKGGLTPTTA VNFALDIARG MTYLHNEPNV IIHRDLKPRN VLLVNSSADH
301: LKVGDFGLSK LIKVQNSHDV YKMTGETGSY RYMAPEVFKH RRYDKKVDVF SFAMILYEML EGEPPFANHE PYEAAKHVSD GHRPTFRSKG CTPDLRELIV
401: KCWDADMNQR PSFLDILKRL EKIKETLPSD HHWGLFTS
101: DRWKNTPLAD AEGARKQKMI ELLKSHGGLS YGQNGSHFEP KPVPPPIPKK CDWEIEPAEL DFSNAAMIGK GSFGEIVKAY WRGTPVAVKR ILPSLSDDRL
201: VIQDFRHEVD LLVKLRHPNI VQFLGAVTER KPLMLITEYL RGGDLHQYLK EKGGLTPTTA VNFALDIARG MTYLHNEPNV IIHRDLKPRN VLLVNSSADH
301: LKVGDFGLSK LIKVQNSHDV YKMTGETGSY RYMAPEVFKH RRYDKKVDVF SFAMILYEML EGEPPFANHE PYEAAKHVSD GHRPTFRSKG CTPDLRELIV
401: KCWDADMNQR PSFLDILKRL EKIKETLPSD HHWGLFTS
Arabidopsis Description
VIKVIK [Source:UniProtKB/TrEMBL;Acc:A0A178W4T8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.