Factsheet for TraesCS2A01G155500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G099400.1
TraesCS3B01G115800.1
TraesCS3D01G099700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14000.1	TraesCS3A01G099400.1	AT2G01950.1	19000166
AT1G14000.1	TraesCS3B01G115800.1	AT2G01950.1	19000166
AT1G14000.1	TraesCS3D01G099700.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G161300.1	Wheat	cytosol	99.1	97.12
TraesCS2B01G180500.1	Wheat	cytosol	98.19	96.24
HORVU2Hr1G028230.14	Barley	cytosol	94.81	92.51
Os07t0632800-01	Rice	plasma membrane	80.81	89.95
Zm00001d022239_P001	Maize	cytosol, extracellular	84.65	85.23
EER99756	Sorghum	cytosol	84.65	84.84
VIT_01s0182g00020.t01	Wine grape	cytosol	74.72	76.09
CDX98142	Canola	cytosol	73.36	74.88
CDY36424	Canola	cytosol	73.36	74.88
Solyc01g010950.2.1	Tomato	extracellular	72.69	74.88
CDY33786	Canola	cytosol	73.59	74.43
AT1G14000.1	Thale cress	cytosol	73.59	74.43
KRG89553	Soybean	nucleus	70.88	74.23
CDY16124	Canola	cytosol	73.36	74.2
KRH50554	Soybean	cytosol, nucleus	70.43	74.11
KRH74933	Soybean	cytosol	71.33	74.0
PGSC0003DMT400072865	Potato	cytosol	72.46	73.79
Solyc05g013070.2.1	Tomato	cytosol	72.46	73.62
Bra026867.1-P	Field mustard	cytosol	73.36	71.43
GSMUA_Achr8P16840_001	Banana	cytosol	20.09	64.03
Bra019692.1-P	Field mustard	nucleus	70.2	56.55
TraesCS3A01G272900.1	Wheat	nucleus	39.05	36.89
TraesCS6A01G218200.1	Wheat	mitochondrion	36.12	33.13
TraesCS3A01G400600.1	Wheat	cytosol, plastid	33.86	30.99

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	MapMan:18.4.1.30	Gene3D:3.30.200.20	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFAM:PF12796	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44023
PANTHER:PTHR44023:SF6	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00248	SUPFAM:SSF48403
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS2A01G155500	EnsemblPlants:TraesCS2A01G155500.1	TIGR:cd00204
TIGR:cd13999	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:102672795..102677549

Molecular Weight (calculated)

49375.1 Da

IEP (calculated)

8.879

GRAVY (calculated)

-0.390

Length

443 amino acids

Sequence
(BLAST)

001: MSGAEEEAAH AAGRGGGGSS GSGGGEGHPR RRFDDKSLVA RTSLILWHTH QNDAAAVRKL LDEDGTLVSA RDYDSRTPLH VAALHGWQDV AECLLAKGAD
101: VNALDRWQNT PLADAEGAKR HAMTELLKKH GGLTFGKTGS HFEAKSIPPP LTKKADWEIN PLELDFTKAV MIGKGSFGEI LKANWRGTPI AVKRILPSLS
201: NDRLVIQDFK HEVNLLIKLR HPNIVQFLGA VTETKPLMLV TEFLRGGDLH QYLKEKGSLS PLTAVNFALD IARGMAYLHN EPNVIIHRDL KPRNILLVNT
301: AANHLKVGDF GLSKIIKSQH ANDVYKMTGE TGSYRYMAPE VFKHRKYDKK VDIFSFAMIL YEMLEGDSPF SSYEPYEAAK YVSDGHRPTF RSKGHTAELK
401: ELTEVCWAAD VNLRPSFLEI LKRLEKIKES LASHDHHWHL FSQ

Best Arabidopsis Sequence Match ( AT1G14000.1 )
(BLAST)

001: MSSDSPAAGD GGEQAAAGTS VPSPSYDKQK EKARVSRTSL ILWHAHQNDA AAVRKLLEED PTLVHARDYD KRTPLHVASL HGWIDVVKCL LEFGADVNAQ
101: DRWKNTPLAD AEGARKQKMI ELLKSHGGLS YGQNGSHFEP KPVPPPIPKK CDWEIEPAEL DFSNAAMIGK GSFGEIVKAY WRGTPVAVKR ILPSLSDDRL
201: VIQDFRHEVD LLVKLRHPNI VQFLGAVTER KPLMLITEYL RGGDLHQYLK EKGGLTPTTA VNFALDIARG MTYLHNEPNV IIHRDLKPRN VLLVNSSADH
301: LKVGDFGLSK LIKVQNSHDV YKMTGETGSY RYMAPEVFKH RRYDKKVDVF SFAMILYEML EGEPPFANHE PYEAAKHVSD GHRPTFRSKG CTPDLRELIV
401: KCWDADMNQR PSFLDILKRL EKIKETLPSD HHWGLFTS

Arabidopsis Description

VIKVIK [Source:UniProtKB/TrEMBL;Acc:A0A178W4T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.