Factsheet for Zm00001d022239_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000055_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14000.1	Zm00001d000055_P001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99756	Sorghum	cytosol	96.36	95.93
Os07t0632800-01	Rice	plasma membrane	82.95	91.71
TraesCS2A01G155500.1	Wheat	cytosol	85.23	84.65
TraesCS2D01G161300.1	Wheat	cytosol	86.14	83.85
TraesCS2B01G180500.1	Wheat	cytosol	85.91	83.63
HORVU2Hr1G028230.14	Barley	cytosol	85.45	82.82
Solyc01g010950.2.1	Tomato	extracellular	73.64	75.35
VIT_01s0182g00020.t01	Wine grape	cytosol	73.64	74.48
KRH74933	Soybean	cytosol	72.27	74.47
Solyc05g013070.2.1	Tomato	cytosol	73.41	74.08
PGSC0003DMT400072865	Potato	cytosol	72.95	73.79
KRH50554	Soybean	cytosol, nucleus	70.45	73.63
CDY36424	Canola	cytosol	72.27	73.27
CDY33786	Canola	cytosol	72.73	73.06
KRG89553	Soybean	nucleus	70.23	73.05
CDX98142	Canola	cytosol	72.05	73.04
CDY16124	Canola	cytosol	72.5	72.83
AT1G14000.1	Thale cress	cytosol	71.82	72.15
Bra026867.1-P	Field mustard	cytosol	72.27	69.89
GSMUA_Achr8P16840_001	Banana	cytosol	21.14	66.91
Bra019692.1-P	Field mustard	nucleus	69.55	55.64
Zm00001d043459_P005	Maize	cytosol	34.55	36.54
Zm00001d017167_P001	Maize	mitochondrion	27.27	29.56
Zm00001d042551_P003	Maize	plastid	31.82	27.24

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	EntrezGene:100382164	MapMan:18.4.1.30	Gene3D:3.30.200.20	UniProt:A0A1D6IKI4
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
InterPro:Kinase-like_dom_sf	ProteinID:ONM59914.1	PFAM:PF07714	PFAM:PF12796	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF6
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00022212FC	EnsemblPlantsGene:Zm00001d022239	EnsemblPlants:Zm00001d022239_P001	EnsemblPlants:Zm00001d022239_T001
SEG:seg	:	:	:	:	:

Description

VH1-interacting kinase

Coordinates

chr7:-:173396699..173401006

Molecular Weight (calculated)

49107.6 Da

IEP (calculated)

7.254

GRAVY (calculated)

-0.386

Length

440 amino acids

Sequence
(BLAST)

001: MSAAAEDAAA AEGGSGGGSS GAGSSEGGAR RRFDDKGLVA RTSLILWHTH QNDVGAVRKL LEEDAALVNA RDYDSRTPLH VAALHGWHDV AECLVANGAD
101: VNAQDRWQNT PLADAEGAKR QPMIELLKEH GGLTYGKTGS HFEPKTIPPP LTNKADWEIN PLELDFTKAT VIGKGSFGEI LKANWRGTPI AVKRILPSLS
201: DDRLVIQDFK HEVNLLIKLR HPNVVQFLGA VTETKPLMLI TEFLRGGDLH QYLKDKGALN PLTAVNFALD IARGMAYLHN EPNVVIHRDL KPRNILLVNS
301: AANHLKVGDF GLSKIIKAQH ANDVYKMTGE TGSYRYMAPE VFKHRKYDKK VDIFSFAMIL YEMLEGDSPF SNYEPYEAAK YVADGHRPVF RKNHTTELKD
401: LVELCWSGDI SLRPSFLEIL KRLEKLKEHY SHENHWHLFQ

Best Arabidopsis Sequence Match ( AT1G14000.1 )
(BLAST)

001: MSSDSPAAGD GGEQAAAGTS VPSPSYDKQK EKARVSRTSL ILWHAHQNDA AAVRKLLEED PTLVHARDYD KRTPLHVASL HGWIDVVKCL LEFGADVNAQ
101: DRWKNTPLAD AEGARKQKMI ELLKSHGGLS YGQNGSHFEP KPVPPPIPKK CDWEIEPAEL DFSNAAMIGK GSFGEIVKAY WRGTPVAVKR ILPSLSDDRL
201: VIQDFRHEVD LLVKLRHPNI VQFLGAVTER KPLMLITEYL RGGDLHQYLK EKGGLTPTTA VNFALDIARG MTYLHNEPNV IIHRDLKPRN VLLVNSSADH
301: LKVGDFGLSK LIKVQNSHDV YKMTGETGSY RYMAPEVFKH RRYDKKVDVF SFAMILYEML EGEPPFANHE PYEAAKHVSD GHRPTFRSKG CTPDLRELIV
401: KCWDADMNQR PSFLDILKRL EKIKETLPSD HHWGLFTS

Arabidopsis Description

VIKVIK [Source:UniProtKB/TrEMBL;Acc:A0A178W4T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.