CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH42483
KRH58580

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14000.1	KRH42483	AT2G01950.1	19000166
AT1G14000.1	KRH58580	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89553	Soybean	nucleus	86.65	87.47
KRH50554	Soybean	cytosol, nucleus	85.71	86.94
VIT_01s0182g00020.t01	Wine grape	cytosol	84.78	83.22
CDX98142	Canola	cytosol	82.44	81.11
CDY36424	Canola	cytosol	82.44	81.11
CDY16124	Canola	cytosol	82.9	80.82
CDY33786	Canola	cytosol	82.9	80.82
AT1G14000.1	Thale cress	cytosol	82.2	80.14
Os07t0632800-01	Rice	plasma membrane	74.0	79.4
PGSC0003DMT400072865	Potato	cytosol	80.8	79.31
Solyc01g010950.2.1	Tomato	extracellular	79.39	78.84
Solyc05g013070.2.1	Tomato	cytosol	80.33	78.67
Bra026867.1-P	Field mustard	cytosol	82.44	77.36
GSMUA_Achr8P16850_001	Banana	cytosol	59.72	75.89
GSMUA_Achr6P10820_001	Banana	cytosol	79.16	73.64
Zm00001d022239_P001	Maize	cytosol, extracellular	74.47	72.27
TraesCS2A01G155500.1	Wheat	cytosol	74.0	71.33
EER99756	Sorghum	cytosol	73.54	71.04
TraesCS2B01G180500.1	Wheat	cytosol	75.18	71.02
TraesCS2D01G161300.1	Wheat	cytosol	74.94	70.8
HORVU2Hr1G028230.14	Barley	cytosol	74.47	70.04
Bra019692.1-P	Field mustard	nucleus	78.45	60.91
KRH73700	Soybean	cytosol	44.26	41.63
KRH21151	Soybean	nucleus	43.33	40.66
KRH14455	Soybean	cytosol, mitochondrion	43.09	40.62
KRH11091	Soybean	nucleus	43.09	40.35
KRH43026	Soybean	nucleus	37.24	33.47
KRH59134	Soybean	plastid	36.53	32.84
KRH18929	Soybean	cytosol	5.15	32.84

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	EntrezGene:100789273	MapMan:18.4.1.30	Gene3D:3.30.200.20	EMBL:ACUP02000095
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:GLYMA_01G052600	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719
GO:GO:0009734	GO:GO:0009742	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	UniProt:I1J5U2	InterPro:IPR000719	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
EnsemblPlants:KRH74933	ProteinID:KRH74933	ProteinID:KRH74933.1	ProteinID:KRH74934.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714
PFAM:PF12796	PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF6	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0002337319	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:6429681..6439422

Molecular Weight (calculated)

48027.4 Da

IEP (calculated)

7.354

GRAVY (calculated)

-0.443

Length

427 amino acids

Sequence
(BLAST)

001: MSSGGGSSEA AAAAKEKEKE KARVSRTSLI LWHAHQDDAA AVRKLLEEDP SLVKARDYDS RTPLHVASLH GWVEVANCLI EFGADVNAQD RWKNTPLADA
101: EGAKRTAMIE LLKSHGGLSY GQNGSHFEPS PVLPPLPNKC DWEVDPSELD FSNSVCIGKG SFGEILKAHW RGTPVAVKRI LPSLSDDRLV IQDFRQEVNL
201: LVKLRHPNVV QFLGAVTDRK PLMLITEYLR GGDLHKYLKD KGALSPSTAI NFGLDIARGM AYLHNEPNVI IHRDLKPRNV LLVNSSADHL KVGDFGLSKL
301: IKVQSAHDVY KMTGETGSYR YMAPEVLKHR RYDKKVDVFS FAMILYEMLE GEPPFSNYEP YDGAKYVAEG HRPSFRGKGY IPELRELTEQ CWDADMKQRP
401: SFIEIIKHLE KIKENLPSDH HWHLFTS

Best Arabidopsis Sequence Match ( AT1G14000.1 )
(BLAST)

001: MSSDSPAAGD GGEQAAAGTS VPSPSYDKQK EKARVSRTSL ILWHAHQNDA AAVRKLLEED PTLVHARDYD KRTPLHVASL HGWIDVVKCL LEFGADVNAQ
101: DRWKNTPLAD AEGARKQKMI ELLKSHGGLS YGQNGSHFEP KPVPPPIPKK CDWEIEPAEL DFSNAAMIGK GSFGEIVKAY WRGTPVAVKR ILPSLSDDRL
201: VIQDFRHEVD LLVKLRHPNI VQFLGAVTER KPLMLITEYL RGGDLHQYLK EKGGLTPTTA VNFALDIARG MTYLHNEPNV IIHRDLKPRN VLLVNSSADH
301: LKVGDFGLSK LIKVQNSHDV YKMTGETGSY RYMAPEVFKH RRYDKKVDVF SFAMILYEML EGEPPFANHE PYEAAKHVSD GHRPTFRSKG CTPDLRELIV
401: KCWDADMNQR PSFLDILKRL EKIKETLPSD HHWGLFTS

Arabidopsis Description

VIKVIK [Source:UniProtKB/TrEMBL;Acc:A0A178W4T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.