Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr2P15100_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G14000.1 | GSMUA_Achr2P15100_001 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0182g00020.t01 | Wine grape | cytosol | 78.0 | 82.3 |
| GSMUA_Achr8P16850_001 | Banana | cytosol | 60.13 | 82.14 |
| PGSC0003DMT400072865 | Potato | cytosol | 76.25 | 80.46 |
| Solyc05g013070.2.1 | Tomato | cytosol | 76.03 | 80.05 |
| Solyc01g010950.2.1 | Tomato | extracellular | 74.73 | 79.77 |
| CDX98142 | Canola | cytosol | 75.38 | 79.72 |
| CDY36424 | Canola | cytosol | 75.16 | 79.49 |
| AT1G14000.1 | Thale cress | cytosol | 75.82 | 79.45 |
| KRH74933 | Soybean | cytosol | 73.64 | 79.16 |
| KRH50554 | Soybean | cytosol, nucleus | 72.55 | 79.1 |
| KRG89553 | Soybean | nucleus | 72.77 | 78.96 |
| CDY33786 | Canola | cytosol | 74.73 | 78.31 |
| CDY16124 | Canola | cytosol | 74.51 | 78.08 |
| Bra026867.1-P | Field mustard | cytosol | 74.51 | 75.16 |
| GSMUA_Achr8P16840_001 | Banana | cytosol | 20.7 | 68.35 |
| Bra019692.1-P | Field mustard | nucleus | 72.98 | 60.91 |
| GSMUA_Achr6P26030_001 | Banana | cytosol | 39.65 | 39.22 |
| GSMUA_Achr2P09520_001 | Banana | cytosol | 38.56 | 38.48 |
| GSMUA_Achr7P24910_001 | Banana | cytosol | 37.25 | 36.85 |
| GSMUA_Achr9P02480_001 | Banana | cytosol | 33.77 | 34.91 |
| GSMUA_Achr9P00040_001 | Banana | mitochondrion | 28.54 | 33.5 |
| GSMUA_Achr8P08560_001 | Banana | mitochondrion | 33.33 | 33.12 |
| GSMUA_Achr2P11410_001 | Banana | mitochondrion | 34.42 | 32.85 |
| GSMUA_Achr10P... | Banana | plastid | 34.2 | 31.46 |
| GSMUA_Achr9P00030_001 | Banana | cytosol | 11.55 | 26.5 |
Protein Annotations
| Gene3D:1.10.510.10 | Gene3D:1.25.40.20 | MapMan:18.4.1.30 | Gene3D:3.30.200.20 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr6G10820_001 |
| EnsemblPlants:GSMUA_Achr6P10820_001 | EnsemblPlants:GSMUA_Achr6T10820_001 | InterPro:IPR000719 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 |
| InterPro:Kinase-like_dom_sf | UniProt:M0T5Y1 | PFAM:PF07714 | PFAM:PF12796 | PIRSF:PIRSF000654 | ScanProsite:PS00107 |
| ScanProsite:PS00108 | PFscan:PS50011 | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR44023 | PANTHER:PTHR44023:SF6 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SMART:SM00248 | SUPFAM:SSF48403 | SUPFAM:SSF56112 |
| InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS | UniParc:UPI00029533D7 | SEG:seg | : | : |
Description
Putative Serine/threonine-protein kinase TNNI3K [Source:GMGC_GENE;Acc:GSMUA_Achr6G10820_001]
Coordinates
chr6:-:7198869..7208021
Molecular Weight (calculated)
50913.6 Da
IEP (calculated)
8.428
GRAVY (calculated)
-0.478
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRNGIGGSS EAMSGDSKEG YATGGGEGAS SGSSSGASSP PRAGPVGGKQ RDKARVSQTS LILWHTHQND VAAVRKLLQE DRGLVNARDY DSRTPLHVAA
101: LHGWIDVAKC LLDHGADVNA QDRWKNTPLA DAEGAKQPSM IELLKSYGGS SYGQNGSHFE PKPVPPPLPS KCDWEIDPSE LDFSTAAIIG KGSFGEIIKA
201: YWRGTPVAVK RILPSLSDDR LVIQDFRHEV NLLVKLRHPN IVQFLGAVTE RKPLMLVTEY LRGGDLHQHL KEKGPLSTVT AINFALDIAR GMAYLHNEPN
301: VIIHRDLKPR NVLLVNSNAD HLKVGDFGLS KLIRAQNAHD VYKMTGETGS YRYMAPEVFK HRKYDKKVDV FSFAMILYEM LEGEPPFSNH EPYEAAKLVA
401: GGNRPSFRAK GYVQELRDLT DECWAADMNR RPSFLVILKR LEKIKENVSQ ENHWSIFNQ
101: LHGWIDVAKC LLDHGADVNA QDRWKNTPLA DAEGAKQPSM IELLKSYGGS SYGQNGSHFE PKPVPPPLPS KCDWEIDPSE LDFSTAAIIG KGSFGEIIKA
201: YWRGTPVAVK RILPSLSDDR LVIQDFRHEV NLLVKLRHPN IVQFLGAVTE RKPLMLVTEY LRGGDLHQHL KEKGPLSTVT AINFALDIAR GMAYLHNEPN
301: VIIHRDLKPR NVLLVNSNAD HLKVGDFGLS KLIRAQNAHD VYKMTGETGS YRYMAPEVFK HRKYDKKVDV FSFAMILYEM LEGEPPFSNH EPYEAAKLVA
401: GGNRPSFRAK GYVQELRDLT DECWAADMNR RPSFLVILKR LEKIKENVSQ ENHWSIFNQ
001: MSSDSPAAGD GGEQAAAGTS VPSPSYDKQK EKARVSRTSL ILWHAHQNDA AAVRKLLEED PTLVHARDYD KRTPLHVASL HGWIDVVKCL LEFGADVNAQ
101: DRWKNTPLAD AEGARKQKMI ELLKSHGGLS YGQNGSHFEP KPVPPPIPKK CDWEIEPAEL DFSNAAMIGK GSFGEIVKAY WRGTPVAVKR ILPSLSDDRL
201: VIQDFRHEVD LLVKLRHPNI VQFLGAVTER KPLMLITEYL RGGDLHQYLK EKGGLTPTTA VNFALDIARG MTYLHNEPNV IIHRDLKPRN VLLVNSSADH
301: LKVGDFGLSK LIKVQNSHDV YKMTGETGSY RYMAPEVFKH RRYDKKVDVF SFAMILYEML EGEPPFANHE PYEAAKHVSD GHRPTFRSKG CTPDLRELIV
401: KCWDADMNQR PSFLDILKRL EKIKETLPSD HHWGLFTS
101: DRWKNTPLAD AEGARKQKMI ELLKSHGGLS YGQNGSHFEP KPVPPPIPKK CDWEIEPAEL DFSNAAMIGK GSFGEIVKAY WRGTPVAVKR ILPSLSDDRL
201: VIQDFRHEVD LLVKLRHPNI VQFLGAVTER KPLMLITEYL RGGDLHQYLK EKGGLTPTTA VNFALDIARG MTYLHNEPNV IIHRDLKPRN VLLVNSSADH
301: LKVGDFGLSK LIKVQNSHDV YKMTGETGSY RYMAPEVFKH RRYDKKVDVF SFAMILYEML EGEPPFANHE PYEAAKHVSD GHRPTFRSKG CTPDLRELIV
401: KCWDADMNQR PSFLDILKRL EKIKETLPSD HHWGLFTS
Arabidopsis Description
VIKVIK [Source:UniProtKB/TrEMBL;Acc:A0A178W4T8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.