Factsheet for GSMUA_Achr8P16840_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
endoplasmic reticulum 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99756	Sorghum	cytosol	67.63	21.27
Zm00001d022239_P001	Maize	cytosol, extracellular	66.91	21.14
GSMUA_Achr6P10820_001	Banana	cytosol	68.35	20.7
TraesCS2D01G161300.1	Wheat	cytosol	66.19	20.35
TraesCS2B01G180500.1	Wheat	cytosol	66.19	20.35
TraesCS2A01G155500.1	Wheat	cytosol	64.03	20.09
GSMUA_Achr9P00030_001	Banana	cytosol	28.06	19.5
HORVU2Hr1G028230.14	Barley	cytosol	63.31	19.38
Os07t0632800-01	Rice	plasma membrane	54.68	19.1
GSMUA_Achr6P26030_001	Banana	cytosol	34.53	10.34
GSMUA_Achr2P09520_001	Banana	cytosol	33.81	10.22
GSMUA_Achr2P11410_001	Banana	mitochondrion	33.81	9.77
GSMUA_Achr7P24910_001	Banana	cytosol	31.65	9.48
GSMUA_Achr9P02480_001	Banana	cytosol	28.06	8.78
GSMUA_Achr8P08560_001	Banana	mitochondrion	28.78	8.66
GSMUA_Achr10P...	Banana	plastid	29.5	8.22
GSMUA_Achr9P00040_001	Banana	mitochondrion	11.51	4.09
GSMUA_Achr8P16850_001	Banana	cytosol	7.91	3.27

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr8G16840_001	EnsemblPlants:GSMUA_Achr8P16840_001	EnsemblPlants:GSMUA_Achr8T16840_001	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	UniProt:M0TR37	PFAM:PF12796	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR44023	PANTHER:PTHR44023:SF6	SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI000295E092	SEG:seg

Description

Integrin-linked protein kinase [Source:GMGC_GENE;Acc:GSMUA_Achr8G16840_001]

Coordinates

chr8:+:14911451..14912904

Molecular Weight (calculated)

14938.5 Da

IEP (calculated)

6.234

GRAVY (calculated)

-0.590

Length

139 amino acids

Sequence
(BLAST)

001: MSSEEGNPIG DGGGEGEGAS SGASPPRTGE KQKEKARVSR TSLILWHAHQ NDAAAVRKLL EEDRGLVNAR DYDSRTPLHV AALHGWINVT GCLLEYGADV
101: NAQDRWNNTP LADAEGAKQH GMIELLKAHG GMSFVRLLQ

Best Arabidopsis Sequence Match ( AT1G14000.1 )
(BLAST)

001: MSSDSPAAGD GGEQAAAGTS VPSPSYDKQK EKARVSRTSL ILWHAHQNDA AAVRKLLEED PTLVHARDYD KRTPLHVASL HGWIDVVKCL LEFGADVNAQ
101: DRWKNTPLAD AEGARKQKMI ELLKSHGGLS YGQNGSHFEP KPVPPPIPKK CDWEIEPAEL DFSNAAMIGK GSFGEIVKAY WRGTPVAVKR ILPSLSDDRL
201: VIQDFRHEVD LLVKLRHPNI VQFLGAVTER KPLMLITEYL RGGDLHQYLK EKGGLTPTTA VNFALDIARG MTYLHNEPNV IIHRDLKPRN VLLVNSSADH
301: LKVGDFGLSK LIKVQNSHDV YKMTGETGSY RYMAPEVFKH RRYDKKVDVF SFAMILYEML EGEPPFANHE PYEAAKHVSD GHRPTFRSKG CTPDLRELIV
401: KCWDADMNQR PSFLDILKRL EKIKETLPSD HHWGLFTS

Arabidopsis Description

VIKVIK [Source:UniProtKB/TrEMBL;Acc:A0A178W4T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.