Factsheet for Bra019692.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024839.1-P
Bra024840.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14000.1	Bra024839.1-P	AT2G01950.1	19000166
AT1G14000.1	Bra024840.1-P	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98142	Canola	cytosol	75.09	95.16
CDY36424	Canola	cytosol	75.09	95.16
AT1G14000.1	Thale cress	cytosol	72.55	91.1
Bra026867.1-P	Field mustard	cytosol	72.18	87.25
VIT_01s0182g00020.t01	Wine grape	cytosol	63.27	80.0
KRH50554	Soybean	cytosol, nucleus	61.09	79.81
KRG89553	Soybean	nucleus	61.27	79.67
KRH74933	Soybean	cytosol	60.91	78.45
Solyc05g013070.2.1	Tomato	cytosol	61.82	77.98
PGSC0003DMT400072865	Potato	cytosol	61.64	77.93
Solyc01g010950.2.1	Tomato	extracellular	60.91	77.91
Os07t0632800-01	Rice	plasma membrane	55.45	76.63
GSMUA_Achr8P16850_001	Banana	cytosol	45.27	74.11
GSMUA_Achr6P10820_001	Banana	cytosol	60.91	72.98
TraesCS2A01G155500.1	Wheat	cytosol	56.55	70.2
Zm00001d022239_P001	Maize	cytosol, extracellular	55.64	69.55
TraesCS2D01G161300.1	Wheat	cytosol	56.91	69.25
TraesCS2B01G180500.1	Wheat	cytosol	56.73	69.03
EER99756	Sorghum	cytosol	55.45	69.0
HORVU2Hr1G028230.14	Barley	cytosol	56.0	67.84
Bra020982.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	30.0	40.05
Bra014553.1-P	Field mustard	cytosol	31.64	37.18
Bra013363.1-P	Field mustard	cytosol	30.36	36.38
Bra007480.1-P	Field mustard	nucleus, plastid	28.0	32.15
Bra003392.1-P	Field mustard	plastid	27.82	32.08
Bra021744.1-P	Field mustard	mitochondrion	25.64	31.26
Bra022866.1-P	Field mustard	mitochondrion	24.18	29.82
Bra007418.1-P	Field mustard	cytosol	32.91	15.77

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	MapMan:18.4.1.30	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
EnsemblPlantsGene:Bra019692	EnsemblPlants:Bra019692.1	EnsemblPlants:Bra019692.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	InterPro:Kinase-like_dom_sf	UniProt:M4DT49
PFAM:PF07714	PFAM:PF12796	PIRSF:PIRSF000615	PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF6	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000253EE01	SEG:seg	:	:	:

Description

AT1G14000 (E=2e-223) VIK | VIK (VH1-INTERACTING KINASE); ATP binding / protein kinase/ protein serine/threonine/tyrosine kinase

Coordinates

chrA06:+:4934881..4938501

Molecular Weight (calculated)

61763.4 Da

IEP (calculated)

9.916

GRAVY (calculated)

-0.776

Length

550 amino acids

Sequence
(BLAST)

001: MSSEASAAGD GGETSGGPAP AYDKQKEKAR VSRTSLILWH AHQNDAAAVR KLLEEDPSLV HARDYDKRTP LHVASLHGWI DVVKCLIEFG ADVNAQDRWK
101: NTPLADAEGA RKQKMIELLK SHGGLSYGQN GSHFEPKPVP PPIPKKCDWE IEPAELDFSN AAMIGKGSFG EIVKAYWRGT PVAVKRILPS LSDDRLVIQD
201: FRHEVDLLVK LRHPNIVQFL GAVTERKPLM LITEYLRGGD LHQYLKEKGG LTPATAVNFA LDIARGMTYL HNEPNVIIHR DLKPRNVLLV NSSADHLKVG
301: DFGLSKLIKV QNSHDVYKMT GETGSYRYMA PEGFKHRKYD KKVDVFSFAM ILYEMLEGEP PFANYEPYEA AKHVSDGHRP TFRSKGCTPD LRELIVKCWD
401: ADMNQRPSDL RRASTQAQQT TDPPDSTTAQ PTEEHTKYRS GFTRPLQTTT QPRLIQAGKP DLARASPKPR NPSRGGADAV LKRSDAPQPD FGGGKAPDLY
501: QMRALTDLSS RRTSRTDGEG ETEKQEKREA RRSPKRRGDR RKRERRRRLT

Best Arabidopsis Sequence Match ( AT1G14000.1 )
(BLAST)

001: MSSDSPAAGD GGEQAAAGTS VPSPSYDKQK EKARVSRTSL ILWHAHQNDA AAVRKLLEED PTLVHARDYD KRTPLHVASL HGWIDVVKCL LEFGADVNAQ
101: DRWKNTPLAD AEGARKQKMI ELLKSHGGLS YGQNGSHFEP KPVPPPIPKK CDWEIEPAEL DFSNAAMIGK GSFGEIVKAY WRGTPVAVKR ILPSLSDDRL
201: VIQDFRHEVD LLVKLRHPNI VQFLGAVTER KPLMLITEYL RGGDLHQYLK EKGGLTPTTA VNFALDIARG MTYLHNEPNV IIHRDLKPRN VLLVNSSADH
301: LKVGDFGLSK LIKVQNSHDV YKMTGETGSY RYMAPEVFKH RRYDKKVDVF SFAMILYEML EGEPPFANHE PYEAAKHVSD GHRPTFRSKG CTPDLRELIV
401: KCWDADMNQR PSFLDILKRL EKIKETLPSD HHWGLFTS

Arabidopsis Description

VIKVIK [Source:UniProtKB/TrEMBL;Acc:A0A178W4T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.