Factsheet for Solyc05g013070.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc04g008430.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14000.1	Solyc04g008430.1.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400072865	Potato	cytosol	98.39	98.62
Solyc01g010950.2.1	Tomato	extracellular	86.24	87.44
VIT_01s0182g00020.t01	Wine grape	cytosol	84.86	85.06
KRH50554	Soybean	cytosol, nucleus	80.5	83.37
KRG89553	Soybean	nucleus	80.73	83.22
CDX98142	Canola	cytosol	81.88	82.26
CDY36424	Canola	cytosol	81.65	82.03
AT1G14000.1	Thale cress	cytosol	81.88	81.51
CDY33786	Canola	cytosol	81.88	81.51
CDY16124	Canola	cytosol	81.65	81.28
Os07t0632800-01	Rice	plasma membrane	73.85	80.9
KRH74933	Soybean	cytosol	78.67	80.33
Bra026867.1-P	Field mustard	cytosol	81.19	77.8
GSMUA_Achr8P16850_001	Banana	cytosol	58.95	76.49
GSMUA_Achr6P10820_001	Banana	cytosol	80.05	76.03
EER99756	Sorghum	cytosol	74.77	73.76
Zm00001d022239_P001	Maize	cytosol, extracellular	74.08	73.41
TraesCS2A01G155500.1	Wheat	cytosol	73.62	72.46
TraesCS2D01G161300.1	Wheat	cytosol	73.85	71.24
HORVU2Hr1G028230.14	Barley	cytosol	73.85	70.93
TraesCS2B01G180500.1	Wheat	cytosol	73.39	70.8
Bra019692.1-P	Field mustard	nucleus	77.98	61.82
Solyc03g005920.2.1	Tomato	cytosol	42.2	39.83
Solyc07g055870.2.1	Tomato	cytosol	41.74	39.65
Solyc02g071740.2.1	Tomato	cytosol	41.28	39.05
Solyc10g017490.1.1	Tomato	cytosol	38.3	38.04
Solyc08g014450.2.1	Tomato	mitochondrion	37.16	34.32
Solyc12g019410.1.1	Tomato	plastid	36.47	33.9
Solyc02g091160.2.1	Tomato	cytosol	9.63	25.77
Solyc02g091170.2.1	Tomato	cytosol	16.28	24.91

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	MapMan:18.4.1.30	Gene3D:3.30.200.20	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009734	GO:GO:0009742	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	UniProt:K4BY28	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFAM:PF12796
PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF6	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc05g013070.2
EnsemblPlants:Solyc05g013070.2.1	UniParc:UPI0002765CB4	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5:+:6165906..6171636

Molecular Weight (calculated)

49206.0 Da

IEP (calculated)

8.325

GRAVY (calculated)

-0.442

Length

436 amino acids

Sequence
(BLAST)

001: MSASEGSSGS SAAAGAVEIP VVSTEKKKEK SRVSKTSQIL WHAHHNDATA VRKLLEEDRT LVQARDYDNR TPLHVAALHG WIDVAKCLID YGADVNAQDR
101: WRNTPLADAE GAKKSGMIEL LKTYGGLSYG QNGSHFEPRP VAPPLPKKCD WEIDPTELDF SNSAIIGKGS FGEILKACWR GTPVAVKRIL PNLSDDRLVI
201: QDFRHEVNLL VKLRHPNIVQ FLGAVTEKKP LMLITEYLRG GDLHQHLKEK GALTPSTAVN FAMDIARGMT YLHNEPNVII HRDLKPRNVL LVNSNADHLK
301: VGDFGLSKLI RVQNSHDVYK MTGETGSYRY MAPEVFKHRK YDKKVDVFSF AMILYEMLEG DPPLSHYEPY EAAKYVAEGH RPMFRAKGFT PELKELVEEC
401: WAPDMNKRPS FLDILKRLEK IKEALPSEHH WHLFTS

Best Arabidopsis Sequence Match ( AT1G14000.1 )
(BLAST)

001: MSSDSPAAGD GGEQAAAGTS VPSPSYDKQK EKARVSRTSL ILWHAHQNDA AAVRKLLEED PTLVHARDYD KRTPLHVASL HGWIDVVKCL LEFGADVNAQ
101: DRWKNTPLAD AEGARKQKMI ELLKSHGGLS YGQNGSHFEP KPVPPPIPKK CDWEIEPAEL DFSNAAMIGK GSFGEIVKAY WRGTPVAVKR ILPSLSDDRL
201: VIQDFRHEVD LLVKLRHPNI VQFLGAVTER KPLMLITEYL RGGDLHQYLK EKGGLTPTTA VNFALDIARG MTYLHNEPNV IIHRDLKPRN VLLVNSSADH
301: LKVGDFGLSK LIKVQNSHDV YKMTGETGSY RYMAPEVFKH RRYDKKVDVF SFAMILYEML EGEPPFANHE PYEAAKHVSD GHRPTFRSKG CTPDLRELIV
401: KCWDADMNQR PSFLDILKRL EKIKETLPSD HHWGLFTS

Arabidopsis Description

VIKVIK [Source:UniProtKB/TrEMBL;Acc:A0A178W4T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.