Factsheet for Solyc02g071740.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008950.2.1
Solyc03g005240.1.1
Solyc06g053930.2.1
Solyc10g077010.1.1
Solyc10g081170.1.1
Solyc11g072240.1.1
Solyc12g099990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G18950.1	Solyc01g008950.2.1	AT2G41090.1	17360592
AT4G18950.1	Solyc10g077010.1.1	AT2G41090.1	17360592
AT4G18950.1	Solyc10g081170.1.1	AT2G41090.1	17360592
AT4G18950.1	Solyc11g072240.1.1	AT2G41090.1	17360592
AT4G18950.1	Solyc12g099990.1.1	AT2G41090.1	17360592
AT4G18950.1	Solyc01g008950.2.1	AT2G41100.1	17360592
AT4G18950.1	Solyc10g077010.1.1	AT2G41100.1	17360592
AT4G18950.1	Solyc10g081170.1.1	AT2G41100.1	17360592
AT4G18950.1	Solyc11g072240.1.1	AT2G41100.1	17360592
AT4G18950.1	Solyc12g099990.1.1	AT2G41100.1	17360592
AT4G18950.1	Solyc03g005240.1.1	AT4G14640.1	17360592
AT4G18950.1	Solyc06g053930.2.1	AT4G14640.1	17360592
AT4G18950.1	Solyc01g008950.2.1	AT5G21274.1	17360592
AT4G18950.1	Solyc10g077010.1.1	AT5G21274.1	17360592
AT4G18950.1	Solyc10g081170.1.1	AT5G21274.1	17360592
AT4G18950.1	Solyc11g072240.1.1	AT5G21274.1	17360592
AT4G18950.1	Solyc12g099990.1.1	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073140	Potato	cytosol	97.83	97.83
Solyc03g005920.2.1	Tomato	cytosol	80.26	80.09
VIT_10s0003g02060.t01	Wine grape	cytosol	77.01	76.84
KRH11091	Soybean	nucleus	72.02	72.81
KRH21151	Soybean	nucleus	71.37	72.31
GSMUA_Achr6P26030_001	Banana	cytosol	72.23	71.77
GSMUA_Achr2P09520_001	Banana	cytosol	67.46	67.61
Bra020982.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	59.65	66.75
GSMUA_Achr7P24910_001	Banana	cytosol	66.16	65.73
CDX99407	Canola	cytosol	65.29	65.58
AT4G18950.1	Thale cress	cytosol	65.08	65.36
Bra013363.1-P	Field mustard	cytosol	64.86	65.14
CDX78907	Canola	cytosol	64.86	65.14
CDX76504	Canola	cytosol	63.99	64.27
Solyc07g055870.2.1	Tomato	cytosol	63.77	64.05
Os01t0748600-02	Rice	cytosol	63.12	62.18
EES03608	Sorghum	cytosol	63.34	61.73
Zm00001d043459_P005	Maize	cytosol	55.1	61.06
TraesCS3A01G272900.1	Wheat	nucleus	61.82	60.77
TraesCS3D01G272300.1	Wheat	cytosol	62.04	60.59
HORVU3Hr1G071430.7	Barley	cytosol	61.39	60.34
TraesCS3B01G306500.1	Wheat	nucleus	61.39	59.96
GSMUA_Achr9P00030_001	Banana	cytosol	24.3	56.0
GSMUA_Achr9P00040_001	Banana	mitochondrion	46.85	55.24
Solyc08g014450.2.1	Tomato	mitochondrion	43.38	42.37
Solyc12g019410.1.1	Tomato	plastid	42.52	41.79
Solyc05g013070.2.1	Tomato	cytosol	39.05	41.28
Solyc01g010950.2.1	Tomato	extracellular	38.39	41.16
Solyc10g017490.1.1	Tomato	cytosol	35.14	36.9
Solyc02g091160.2.1	Tomato	cytosol	9.98	28.22
Solyc02g091170.2.1	Tomato	cytosol	16.49	26.67

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	MapMan:18.4.1.30	Gene3D:3.30.200.20	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556
InterPro:IPR000719	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:K4B8E9	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PFAM:PF12796	PIRSF:PIRSF000654	PRINTS:PR00109	PFscan:PS50011	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF7	InterPro:Prot_kinase_dom	SMART:SM00248	SUPFAM:SSF48403
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	EnsemblPlantsGene:Solyc02g071740.2	EnsemblPlants:Solyc02g071740.2.1	UniParc:UPI0002769010	SEG:seg

Description

No Description!

Coordinates

chr2:-:41108910..41115877

Molecular Weight (calculated)

52387.3 Da

IEP (calculated)

5.925

GRAVY (calculated)

-0.542

Length

461 amino acids

Sequence
(BLAST)

001: MEPVRFLLGK QSSLAPERVI AAVEIESEDG EEGDVIDIDP RIRLMYSANE GDIEGIKELL DSGTDVNFRD DDERTALHVA ACQGYSDVVQ LLIDNGAEID
101: SEDRWGSTPL GDAIHYKNHH VIKLLEEHGA KPPMAPMHVN NSREVPEYEI DAKELDFTNS IELAKGTFHI ASWRGIKVAV KKFGDDEIAD EDKVTAFRDE
201: LALLQKIRHP NVVQFLGAVT QSSPMMIVTE YLPKGDLHAY LKNEESLRPT KAIRFAIDIA RGLNYLHEIK PEAIIHRDLE PSNILRDDTG HLKVADFGVS
301: KLLKVTNRVK EDKPLTCDNT SCRYVAPEVF KNEEYDTKVD VFSFALILQE MIEGCPPFKA KNENEVPKHY AAKERPPFKA PAKCYAHGLK ELIEECWNEN
401: PAMRPTFKKI IPRLEAIYNK FGQKRRWKVR PLKCFQNFEA MWKKENSSSR RNGSSRSNSS I

Best Arabidopsis Sequence Match ( AT4G18950.1 )
(BLAST)

001: MEEDYQQPRF TIGRQSSMAP EKIPEPSVHS EEEVFEDGEE IDGGVRLMYL ANEGDIEGIK ELIDSGIDAN YRDIDDRTAL HVAACQGLKD VVELLLDRKA
101: EVDPKDRWGS TPFADAIFYK NIDVIKILEI HGAKHPMAPM HVKTAREVPE YEINPSELDF TQSKEITKGT YCMAMWRGIQ VAVKKLDDEV LSDDDQVRKF
201: HDELALLQRL RHPNIVQFLG AVTQSNPMMI VTEYLPRGDL RELLKRKGQL KPATAVRYAL DIARGMSYLH EIKGDPIIHR DLEPSNILRD DSGHLKVADF
301: GVSKLVTVKE DKPFTCQDIS CRYIAPEVFT SEEYDTKADV FSFALIVQEM IEGRMPFAEK EDSEASEAYA GKHRPLFKAP SKNYPHGLKT LIEECWHEKP
401: AKRPTFREII KRLESILHHM GHKRQWRMRP LTCFQNFEHK KKHNWDLSSH DGSSSGSHL

Arabidopsis Description

At4g18950/F13C5_120 [Source:UniProtKB/TrEMBL;Acc:Q93Z30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.