Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G272900.1 | Wheat | nucleus | 97.88 | 98.51 |
| TraesCS3B01G306500.1 | Wheat | nucleus | 97.67 | 97.67 |
| HORVU3Hr1G071430.7 | Barley | cytosol | 95.76 | 96.38 |
| EES03608 | Sorghum | cytosol | 83.9 | 83.72 |
| Os01t0748600-02 | Rice | cytosol | 81.57 | 82.27 |
| Zm00001d043459_P005 | Maize | cytosol | 72.46 | 82.21 |
| GSMUA_Achr6P26030_001 | Banana | cytosol | 62.29 | 63.36 |
| VIT_10s0003g02060.t01 | Wine grape | cytosol | 61.65 | 62.99 |
| Solyc02g071740.2.1 | Tomato | cytosol | 60.59 | 62.04 |
| PGSC0003DMT400073140 | Potato | cytosol | 60.38 | 61.82 |
| GSMUA_Achr2P09520_001 | Banana | cytosol | 60.17 | 61.74 |
| Solyc03g005920.2.1 | Tomato | cytosol | 60.38 | 61.69 |
| GSMUA_Achr7P24910_001 | Banana | cytosol | 60.38 | 61.42 |
| KRH21151 | Soybean | nucleus | 59.11 | 61.32 |
| KRH11091 | Soybean | nucleus | 59.11 | 61.18 |
| PGSC0003DMT400035023 | Potato | cytosol | 59.75 | 61.04 |
| Bra020982.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 52.75 | 60.44 |
| CDX99407 | Canola | cytosol | 56.57 | 58.17 |
| Bra013363.1-P | Field mustard | cytosol | 56.36 | 57.95 |
| CDX78907 | Canola | cytosol | 56.14 | 57.73 |
| AT4G18950.1 | Thale cress | cytosol | 55.93 | 57.52 |
| CDX76504 | Canola | cytosol | 55.72 | 57.3 |
| GSMUA_Achr9P00030_001 | Banana | cytosol | 20.97 | 49.5 |
| TraesCS6D01G201400.1 | Wheat | mitochondrion | 40.89 | 40.29 |
| TraesCS2D01G161300.1 | Wheat | cytosol | 37.29 | 38.94 |
| TraesCS3D01G395000.1 | Wheat | cytosol, plastid | 36.44 | 35.54 |
Protein Annotations
| Gene3D:1.10.510.10 | Gene3D:1.25.40.20 | MapMan:18.4.1.30 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR002110 | InterPro:IPR020683 |
| InterPro:IPR036770 | InterPro:Kinase-like_dom_sf | PFAM:PF07714 | PFAM:PF12796 | PIRSF:PIRSF000654 | PFscan:PS50011 |
| PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR44023 | PANTHER:PTHR44023:SF7 | InterPro:Prot_kinase_dom | SMART:SM00248 |
| SUPFAM:SSF48403 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | EnsemblPlantsGene:TraesCS3D01G272300 | EnsemblPlants:TraesCS3D01G272300.1 | TIGR:cd00204 |
| TIGR:cd13999 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:378024343..378028126
Molecular Weight (calculated)
53169.2 Da
IEP (calculated)
6.764
GRAVY (calculated)
-0.609
Length
472 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPQPPTSTE EEAAAGSTTP RFRLGKQSSL APNRGGGGGE NGAEASGEAA GVASFQMMYL AHEGNAEGIR ELLDAGADPN FRDSDGRTAL HISACEGHAE
101: VVELLLDRGA EAVVEDQWGS TPLADAMHYQ NHDVIKILEK HGSNHKVAPM HVNSDRDVPE YEIDPDELDF TNGKDLAKGT FRKATWRGIL VAVKKLDDDV
201: LTDENKVQAF RDELDVLQLI RHPNVVQFLG AVTQTNPMMI VMEFMPKGDL RKHLNRKGAL EPLYAVKLAL DIARGMSYLH EHKPQAIIHR DLEPSNILRD
301: DTGHLKVADF DLCKMLKWRR KVREDKPVTS PGNACRYVAP EVLRKEEYDN KVDVFSFALI LQEMIEGCLP FHDKKIDEIE KAHSSKERPP FRAPAKHYAY
401: GLRELIEKCW SENPADRPNF RVVIDRLSAI QIELARRNRW KVRPLKCFLS FEGLRKKDRN EGSTNRSSRS SR
101: VVELLLDRGA EAVVEDQWGS TPLADAMHYQ NHDVIKILEK HGSNHKVAPM HVNSDRDVPE YEIDPDELDF TNGKDLAKGT FRKATWRGIL VAVKKLDDDV
201: LTDENKVQAF RDELDVLQLI RHPNVVQFLG AVTQTNPMMI VMEFMPKGDL RKHLNRKGAL EPLYAVKLAL DIARGMSYLH EHKPQAIIHR DLEPSNILRD
301: DTGHLKVADF DLCKMLKWRR KVREDKPVTS PGNACRYVAP EVLRKEEYDN KVDVFSFALI LQEMIEGCLP FHDKKIDEIE KAHSSKERPP FRAPAKHYAY
401: GLRELIEKCW SENPADRPNF RVVIDRLSAI QIELARRNRW KVRPLKCFLS FEGLRKKDRN EGSTNRSSRS SR
001: MTIKPKSPAR FKLGRQSSLA PESRTPIDTL TEDEDDDLAA AATAGIGDPT IRLMYLANEG DIDGINKMLD SGTNVDYRDI DARTALHVAA CQGRTDVVEL
101: LLSRGAKVDT KDRWGSTPLA DAVYYKNHDV IKLLEKHGAK PTIAPMHVLT DKEVPEYEIH PTELDFSNSV KISKGTFNKA SWRGIDVAVK TFGEEMFTDE
201: DKVNAFRDEL ALLQKIRHPN VVQFLGAVTQ STPMMIVTEY LPKGDLRQYL DRKGPLMPAH AVKFALEIAR GMNYLHEHKP EAIIHCDLEP PNILRDDSGH
301: LKVADFGVSK LLVVKKTVKK DRPVVTCLDS SWRYMAPEVY RNEEYDTKVD VFSFALILQE MIEGCEPFHE IEDREVPKAY IEDERPPFNA PTKSYPFGLQ
401: ELIQDCWDKE ASKRPTFRVI ISTLELISDR IARKRSWKVM LGRCLPRFRL FTKRDYVNPG GSNRSSGSFN R
101: LLSRGAKVDT KDRWGSTPLA DAVYYKNHDV IKLLEKHGAK PTIAPMHVLT DKEVPEYEIH PTELDFSNSV KISKGTFNKA SWRGIDVAVK TFGEEMFTDE
201: DKVNAFRDEL ALLQKIRHPN VVQFLGAVTQ STPMMIVTEY LPKGDLRQYL DRKGPLMPAH AVKFALEIAR GMNYLHEHKP EAIIHCDLEP PNILRDDSGH
301: LKVADFGVSK LLVVKKTVKK DRPVVTCLDS SWRYMAPEVY RNEEYDTKVD VFSFALILQE MIEGCEPFHE IEDREVPKAY IEDERPPFNA PTKSYPFGLQ
401: ELIQDCWDKE ASKRPTFRVI ISTLELISDR IARKRSWKVM LGRCLPRFRL FTKRDYVNPG GSNRSSGSFN R
Arabidopsis Description
Integrin-linked protein kinase family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMD5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.