Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G272300.1 | Wheat | cytosol | 98.51 | 97.88 |
| TraesCS3B01G306500.1 | Wheat | nucleus | 96.59 | 95.97 |
| HORVU3Hr1G071430.7 | Barley | cytosol | 95.95 | 95.95 |
| EES03608 | Sorghum | cytosol | 84.01 | 83.3 |
| Os01t0748600-02 | Rice | cytosol | 81.88 | 82.05 |
| Zm00001d043459_P005 | Maize | cytosol | 72.49 | 81.73 |
| GSMUA_Achr6P26030_001 | Banana | cytosol | 62.47 | 63.15 |
| VIT_10s0003g02060.t01 | Wine grape | cytosol | 61.62 | 62.55 |
| Solyc02g071740.2.1 | Tomato | cytosol | 60.77 | 61.82 |
| PGSC0003DMT400073140 | Potato | cytosol | 60.55 | 61.61 |
| GSMUA_Achr2P09520_001 | Banana | cytosol | 60.34 | 61.52 |
| Solyc03g005920.2.1 | Tomato | cytosol | 60.34 | 61.26 |
| KRH21151 | Soybean | nucleus | 59.28 | 61.1 |
| GSMUA_Achr7P24910_001 | Banana | cytosol | 60.34 | 60.99 |
| KRH11091 | Soybean | nucleus | 59.28 | 60.96 |
| PGSC0003DMT400035023 | Potato | cytosol | 59.7 | 60.61 |
| Bra020982.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 52.67 | 59.95 |
| CDX99407 | Canola | cytosol | 56.5 | 57.73 |
| Bra013363.1-P | Field mustard | cytosol | 56.29 | 57.52 |
| CDX78907 | Canola | cytosol | 56.08 | 57.3 |
| AT4G18950.1 | Thale cress | cytosol | 55.86 | 57.08 |
| CDX76504 | Canola | cytosol | 55.65 | 56.86 |
| GSMUA_Achr9P00030_001 | Banana | cytosol | 20.9 | 49.0 |
| TraesCS6A01G218200.1 | Wheat | mitochondrion | 40.94 | 39.75 |
| TraesCS2A01G155500.1 | Wheat | cytosol | 36.89 | 39.05 |
| TraesCS3A01G400600.1 | Wheat | cytosol, plastid | 36.03 | 34.92 |
Protein Annotations
| Gene3D:1.10.510.10 | Gene3D:1.25.40.20 | MapMan:18.4.1.30 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR002110 | InterPro:IPR020683 |
| InterPro:IPR036770 | InterPro:Kinase-like_dom_sf | PFAM:PF07714 | PFAM:PF12796 | PIRSF:PIRSF000654 | PFscan:PS50011 |
| PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR44023 | PANTHER:PTHR44023:SF7 | InterPro:Prot_kinase_dom | SMART:SM00248 |
| SUPFAM:SSF48403 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | EnsemblPlantsGene:TraesCS3A01G272900 | EnsemblPlants:TraesCS3A01G272900.1 | TIGR:cd00204 |
| TIGR:cd13999 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:502097382..502101101
Molecular Weight (calculated)
52995.1 Da
IEP (calculated)
6.873
GRAVY (calculated)
-0.598
Length
469 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPKPPTSSE EEAAAGPTTP RFRLGKQSSL APSRGGENGA EVSGEAAGVA SFQMMYLAHE GNAEGIRELL DAGADPNFRD SDGRTALHIS ACEGHAEVVA
101: LLLDRGAEAV VEDQWGSTPL ADAMHYQNHD VIKILEKHDS NHKVAPMHVN SDRDVPEYEI DPDELDFTNG KDLAKGTFRK ATWRGILVAV KKLDDDVLTD
201: ENKVQAFRDE LDVLQLIRHP NVVQFLGAVT QTNPMMIVME FMPKGDLRKH LNRKGALEPL YAVKLALDIA RGMSYLHEHK PQAIIHRDLE PSNILRDDTG
301: HLKVADFDLC KMLKWRRKVR EDKPVTSPGN ACRYVAPEVL RKEEYDNKVD VFSFALILQE MIEGCLPFHD KKIDEIEKAH SSKERPPFRA PAKHYAYGLR
401: ELIEKCWSEN PADRPNFRVV IDRLSAIQIE LARRNRWKVR PLKCFLSFEG LRKKDRNEGS TNRSSRSSR
101: LLLDRGAEAV VEDQWGSTPL ADAMHYQNHD VIKILEKHDS NHKVAPMHVN SDRDVPEYEI DPDELDFTNG KDLAKGTFRK ATWRGILVAV KKLDDDVLTD
201: ENKVQAFRDE LDVLQLIRHP NVVQFLGAVT QTNPMMIVME FMPKGDLRKH LNRKGALEPL YAVKLALDIA RGMSYLHEHK PQAIIHRDLE PSNILRDDTG
301: HLKVADFDLC KMLKWRRKVR EDKPVTSPGN ACRYVAPEVL RKEEYDNKVD VFSFALILQE MIEGCLPFHD KKIDEIEKAH SSKERPPFRA PAKHYAYGLR
401: ELIEKCWSEN PADRPNFRVV IDRLSAIQIE LARRNRWKVR PLKCFLSFEG LRKKDRNEGS TNRSSRSSR
001: MTIKPKSPAR FKLGRQSSLA PESRTPIDTL TEDEDDDLAA AATAGIGDPT IRLMYLANEG DIDGINKMLD SGTNVDYRDI DARTALHVAA CQGRTDVVEL
101: LLSRGAKVDT KDRWGSTPLA DAVYYKNHDV IKLLEKHGAK PTIAPMHVLT DKEVPEYEIH PTELDFSNSV KISKGTFNKA SWRGIDVAVK TFGEEMFTDE
201: DKVNAFRDEL ALLQKIRHPN VVQFLGAVTQ STPMMIVTEY LPKGDLRQYL DRKGPLMPAH AVKFALEIAR GMNYLHEHKP EAIIHCDLEP PNILRDDSGH
301: LKVADFGVSK LLVVKKTVKK DRPVVTCLDS SWRYMAPEVY RNEEYDTKVD VFSFALILQE MIEGCEPFHE IEDREVPKAY IEDERPPFNA PTKSYPFGLQ
401: ELIQDCWDKE ASKRPTFRVI ISTLELISDR IARKRSWKVM LGRCLPRFRL FTKRDYVNPG GSNRSSGSFN R
101: LLSRGAKVDT KDRWGSTPLA DAVYYKNHDV IKLLEKHGAK PTIAPMHVLT DKEVPEYEIH PTELDFSNSV KISKGTFNKA SWRGIDVAVK TFGEEMFTDE
201: DKVNAFRDEL ALLQKIRHPN VVQFLGAVTQ STPMMIVTEY LPKGDLRQYL DRKGPLMPAH AVKFALEIAR GMNYLHEHKP EAIIHCDLEP PNILRDDSGH
301: LKVADFGVSK LLVVKKTVKK DRPVVTCLDS SWRYMAPEVY RNEEYDTKVD VFSFALILQE MIEGCEPFHE IEDREVPKAY IEDERPPFNA PTKSYPFGLQ
401: ELIQDCWDKE ASKRPTFRVI ISTLELISDR IARKRSWKVM LGRCLPRFRL FTKRDYVNPG GSNRSSGSFN R
Arabidopsis Description
Integrin-linked protein kinase family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMD5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.