Factsheet for TraesCS3A01G400600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G395000.1	Wheat	cytosol, plastid	98.55	98.55
TraesCS3B01G433600.1	Wheat	cytosol, plastid	96.28	96.28
HORVU3Hr1G090030.12	Barley	cytosol, plastid	90.91	85.77
Os01t0892800-02	Rice	nucleus, plastid	74.17	75.26
KXG33869	Sorghum	mitochondrion	70.66	71.55
Zm00001d042551_P003	Maize	plastid	70.25	66.15
CDY19106	Canola	mitochondrion	39.05	62.79
VIT_05s0094g01080.t01	Wine grape	plastid	60.74	62.29
KRH59134	Soybean	plastid	59.71	60.84
AT2G31800.1	Thale cress	mitochondrion	59.3	60.29
KRH43026	Soybean	nucleus	59.09	60.21
PGSC0003DMT400064944	Potato	mitochondrion, plastid	58.68	60.17
Solyc08g014450.2.1	Tomato	mitochondrion	58.47	59.96
AT2G43850.1	Thale cress	plastid	58.47	59.08
CDY15369	Canola	cytosol	35.74	58.84
Bra021744.1-P	Field mustard	mitochondrion	54.55	58.54
Bra022866.1-P	Field mustard	mitochondrion	53.93	58.52
GSMUA_Achr2P11410_001	Banana	mitochondrion	57.85	58.21
CDX71872	Canola	cytosol, plastid	57.23	57.83
GSMUA_Achr9P02480_001	Banana	cytosol	52.89	57.66
PGSC0003DMT400052486	Potato	nucleus, plastid	55.79	57.57
CDY05975	Canola	nucleus, plastid	56.61	57.2
Bra007480.1-P	Field mustard	nucleus, plastid	56.61	57.2
Solyc12g019410.1.1	Tomato	plastid	55.37	57.14
Bra003392.1-P	Field mustard	plastid	56.2	57.02
CDX98397	Canola	plastid	55.99	56.93
CDX67815	Canola	plastid	55.99	56.93
AT3G59830.1	Thale cress	plastid	55.99	56.81
CDX79441	Canola	mitochondrion	57.02	56.79
CDX84758	Canola	mitochondrion	57.02	56.79
KRH18929	Soybean	cytosol	7.85	56.72
CDY15368	Canola	mitochondrion	20.45	54.7
TraesCS6A01G218200.1	Wheat	mitochondrion	53.72	53.83
CDY19105	Canola	cytosol	18.59	51.72
TraesCS3A01G272900.1	Wheat	nucleus	34.92	36.03
TraesCS2A01G155500.1	Wheat	cytosol	30.99	33.86

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	MapMan:18.4.1.30	Gene3D:3.30.200.20	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFAM:PF12796	PIRSF:PIRSF000654
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF5
InterPro:Prot_kinase_dom	SMART:SM00220	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS3A01G400600	EnsemblPlants:TraesCS3A01G400600.1	TIGR:cd00204	:	:

Description

No Description!

Coordinates

chr3A:-:647190929..647193660

Molecular Weight (calculated)

54208.1 Da

IEP (calculated)

8.047

GRAVY (calculated)

-0.483

Length

484 amino acids

Sequence
(BLAST)

001: MEEELSQMEP GTKVTLQRQA SSGSLTQGPS GELRRQTSLE SSPRSGRGGN RHLFGRQSSM DPNRRRGRSQ SPVGSQADQD LAVPDNLDST MQLLFLACQG
101: DAPGVEALLH GGVDVNSINL DGRTALHVAA CEGQREVVSV LLDWQANIDA RDRWGSTAVA DSKCYGHMDI YDLLKSHGGK APRNRRTPMM VSNPGEIPEY
201: ELNPGELQFR KGDEVLKGTY QVAKWNGTKV SVKIVDRETY SDQEAINSFR HELTVFEKVR HPNVVQFIGA VTQNIPMMIV SEYHANADLG SLIQRKGRLN
301: GHKVLRYALD IARGMTYLHQ CKPDPIIHCD LKPKNIFLDN GGLMKVGGFG LMRLSKMAPD KVKLMNHEAI VHTSSYYTAP EMHRNEVFDM SVDAYAFGFI
401: LYEMVEGLPN MESTTVIARC EGMRPSLKNK LKGYPSDFKG LIEECWETHP MARPTFSEMI VRLDKIYAHC MKHGAWKESL KIWK

Best Arabidopsis Sequence Match ( AT2G31800.1 )
(BLAST)

001: MANVVGQLKR GISRQFSTGS LRRTLSRQFT RQASHDPRRN NMRFSFGRQS SLDPIRRSPD GSNGPQLAVP DNLDATMQLL FVACRGDVEG VQDLLDEGID
101: VNSIDLDGRT ALHIAACEGH VDVVKLLLTR KANIDARDRW GSTAAADAKY YGNMDVFNIL KARGAKVPKT KRTPMVVANP REVPEYELNP QELQVRKADG
201: ISKGIYQVAK WNGTKVSVKI LDKDLYKDSD TINAFKHELT LFEKVRHPNV VQFVGAVTQN VPMMIVSEYH PKGDLGSYLQ KKGRLSPAKV LRFALDIARG
301: MNYLHECKPE PVIHCDLKPK NIMLDSGGHL KVAGFGLISF AKLSSDKSKI LNHGAHIDPS NYCMAPEVYK DEIFDRSVDS YSFGVVLYEM IEGVQPFHPK
401: PPEEAVKLMC LEGRRPSFKA KSKSCPQEMR ELIEECWDTE TFVRPTFSEI IVRLDKIFVH CSKQGWWKDT FKFPWK

Arabidopsis Description

At2g31800 [Source:UniProtKB/TrEMBL;Acc:Q1JPN7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.