Factsheet for PGSC0003DMT400052486

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
mitochondrion 3
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g019410.1.1	Tomato	plastid	96.16	96.16
PGSC0003DMT400064944	Potato	mitochondrion, plastid	81.45	80.93
KRH59134	Soybean	plastid	79.1	78.11
KRH43026	Soybean	nucleus	78.04	77.05
VIT_05s0094g01080.t01	Wine grape	plastid	76.76	76.27
CDY19106	Canola	mitochondrion	47.97	74.75
CDY15369	Canola	cytosol	46.7	74.49
AT2G31800.1	Thale cress	mitochondrion	73.99	72.9
Bra021744.1-P	Field mustard	mitochondrion	69.94	72.73
KRH18929	Soybean	cytosol	10.23	71.64
Bra022866.1-P	Field mustard	mitochondrion	68.02	71.52
CDY19105	Canola	cytosol	25.59	68.97
CDX79441	Canola	mitochondrion	71.43	68.93
CDX84758	Canola	mitochondrion	71.43	68.93
CDY15368	Canola	mitochondrion	26.23	67.96
GSMUA_Achr10P...	Banana	plastid	69.3	65.13
GSMUA_Achr2P11410_001	Banana	mitochondrion	65.46	63.83
GSMUA_Achr8P08560_001	Banana	mitochondrion	62.47	63.42
GSMUA_Achr9P02480_001	Banana	cytosol	59.28	62.61
KXG30604	Sorghum	mitochondrion	63.11	60.53
TraesCS6D01G201400.1	Wheat	mitochondrion	60.34	59.08
TraesCS6B01G247800.1	Wheat	mitochondrion	60.55	59.04
HORVU6Hr1G055820.2	Barley	mitochondrion	60.77	59.01
TraesCS6A01G218200.1	Wheat	mitochondrion	60.55	58.8
Os01t0892800-02	Rice	nucleus, plastid	59.28	58.28
Os02t0608500-01	Rice	plasma membrane	62.05	57.97
TraesCS3D01G395000.1	Wheat	cytosol, plastid	57.78	55.99
TraesCS3B01G433600.1	Wheat	cytosol, plastid	57.57	55.79
TraesCS3A01G400600.1	Wheat	cytosol, plastid	57.57	55.79
KXG33869	Sorghum	mitochondrion	55.86	54.81
Zm00001d017167_P001	Maize	mitochondrion	47.12	54.43
HORVU3Hr1G090030.12	Barley	cytosol, plastid	56.72	51.85
Zm00001d042551_P003	Maize	plastid	54.8	50.0
PGSC0003DMT400044544	Potato	cytosol	37.53	43.78
PGSC0003DMT400073140	Potato	cytosol	41.79	42.52
PGSC0003DMT400035023	Potato	cytosol	41.58	42.21
PGSC0003DMT400026617	Potato	cytosol	22.17	37.14
PGSC0003DMT400072865	Potato	cytosol	34.33	37.01
PGSC0003DMT400078613	Potato	cytosol	29.42	32.09

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	EntrezGene:102580423	MapMan:18.4.1.30	Gene3D:3.30.200.20	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	InterPro:Kinase-like_dom_sf	UniProt:M1BTH9	PFAM:PF07714
PFAM:PF12796	EnsemblPlantsGene:PGSC0003DMG400020370	PGSC:PGSC0003DMG400020370	EnsemblPlants:PGSC0003DMT400052486	PIRSF:PIRSF000654	PFscan:PS50011
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF4	InterPro:Prot_kinase_dom	SMART:SM00248
SUPFAM:SSF48403	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI0002963793	RefSeq:XP_006353107.1	:

Description

Integrin-linked protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400020370]

Coordinates

chr12:-:12834112..12842882

Molecular Weight (calculated)

53108.0 Da

IEP (calculated)

9.571

GRAVY (calculated)

-0.510

Length

469 amino acids

Sequence
(BLAST)

001: MEQLKRGISR QFSTELFRKS GKFSFKRQSS LDPRRNNLRF SFGRQSSLDP LQRSPSIENA GRTVPENLDS TMQLLFMACK GDVKGVQDLL DEGIDVNNID
101: LDGRTALHIA ACEGHVEVAK LLLSRKANMN SRDRWGSTAA ADAKHYGNAE IYEMLKARGA KVPKVRKTPM AVANLREVPE YELNPLELQI RKSDGISKGS
201: YQVAKWNGTK VSVKILDKDS YKDPESINAF KHELTLLEKV RHPNIVQFVG AVTQNIPMMI VSEYHPRGDL GSYLQKKGRI SPSKALKYAL DVARGMNYLH
301: ECKPDPIIHC NLNPKNILLD NGDHLKVAGF GLIKLSKISP DKAKLVQPEG FDRSSPYVAP EIYKDEIFDR NADIYSFGIL LYEMLEGTPP FNTKSPEEAT
401: RLMCLEGQRP AFKSKSKYPP ELRELIEECW DPEAFVRPTF SEVIVRMNKI FANSSKQGWL KDTFKLPWL

Best Arabidopsis Sequence Match ( AT2G31800.1 )
(BLAST)

001: MANVVGQLKR GISRQFSTGS LRRTLSRQFT RQASHDPRRN NMRFSFGRQS SLDPIRRSPD GSNGPQLAVP DNLDATMQLL FVACRGDVEG VQDLLDEGID
101: VNSIDLDGRT ALHIAACEGH VDVVKLLLTR KANIDARDRW GSTAAADAKY YGNMDVFNIL KARGAKVPKT KRTPMVVANP REVPEYELNP QELQVRKADG
201: ISKGIYQVAK WNGTKVSVKI LDKDLYKDSD TINAFKHELT LFEKVRHPNV VQFVGAVTQN VPMMIVSEYH PKGDLGSYLQ KKGRLSPAKV LRFALDIARG
301: MNYLHECKPE PVIHCDLKPK NIMLDSGGHL KVAGFGLISF AKLSSDKSKI LNHGAHIDPS NYCMAPEVYK DEIFDRSVDS YSFGVVLYEM IEGVQPFHPK
401: PPEEAVKLMC LEGRRPSFKA KSKSCPQEMR ELIEECWDTE TFVRPTFSEI IVRLDKIFVH CSKQGWWKDT FKFPWK

Arabidopsis Description

At2g31800 [Source:UniProtKB/TrEMBL;Acc:Q1JPN7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.