Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g005920.2.1 | Tomato | cytosol | 97.62 | 97.62 |
| PGSC0003DMT400073140 | Potato | cytosol | 79.65 | 79.83 |
| VIT_10s0003g02060.t01 | Wine grape | cytosol | 73.16 | 73.16 |
| KRH11091 | Soybean | nucleus | 71.21 | 72.15 |
| KRH21151 | Soybean | nucleus | 71.0 | 72.09 |
| GSMUA_Achr6P26030_001 | Banana | cytosol | 68.61 | 68.32 |
| Bra020982.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 59.74 | 66.99 |
| GSMUA_Achr7P24910_001 | Banana | cytosol | 67.1 | 66.81 |
| GSMUA_Achr2P09520_001 | Banana | cytosol | 65.8 | 66.09 |
| CDX99407 | Canola | cytosol | 65.15 | 65.58 |
| PGSC0003DMT400044544 | Potato | cytosol | 56.71 | 65.17 |
| Bra013363.1-P | Field mustard | cytosol | 64.72 | 65.14 |
| AT4G18950.1 | Thale cress | cytosol | 64.72 | 65.14 |
| CDX78907 | Canola | cytosol | 64.72 | 65.14 |
| CDX76504 | Canola | cytosol | 64.07 | 64.49 |
| Zm00001d043459_P005 | Maize | cytosol | 54.98 | 61.06 |
| Os01t0748600-02 | Rice | cytosol | 61.47 | 60.68 |
| EES03608 | Sorghum | cytosol | 62.12 | 60.68 |
| TraesCS3D01G272300.1 | Wheat | cytosol | 61.04 | 59.75 |
| TraesCS3A01G272900.1 | Wheat | nucleus | 60.61 | 59.7 |
| HORVU3Hr1G071430.7 | Barley | cytosol | 60.39 | 59.49 |
| TraesCS3B01G306500.1 | Wheat | nucleus | 60.17 | 58.9 |
| GSMUA_Achr9P00030_001 | Banana | cytosol | 24.03 | 55.5 |
| GSMUA_Achr9P00040_001 | Banana | mitochondrion | 46.75 | 55.24 |
| PGSC0003DMT400072865 | Potato | cytosol | 39.61 | 42.07 |
| PGSC0003DMT400052486 | Potato | nucleus, plastid | 42.21 | 41.58 |
| PGSC0003DMT400064944 | Potato | mitochondrion, plastid | 42.21 | 41.31 |
| PGSC0003DMT400026617 | Potato | cytosol | 24.03 | 39.64 |
| PGSC0003DMT400078613 | Potato | cytosol | 28.36 | 30.47 |
Protein Annotations
| Gene3D:1.10.510.10 | Gene3D:1.25.40.20 | EntrezGene:102581119 | MapMan:18.4.1.30 | Gene3D:3.30.200.20 | InterPro:Ankyrin_rpt |
| InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:Kinase-like_dom_sf | UniProt:M1B1P7 | PFAM:PF07714 |
| PFAM:PF12796 | EnsemblPlantsGene:PGSC0003DMG400013468 | PGSC:PGSC0003DMG400013468 | EnsemblPlants:PGSC0003DMT400035023 | PIRSF:PIRSF000654 | PRINTS:PR00109 |
| PFscan:PS50011 | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR44023 | PANTHER:PTHR44023:SF7 | InterPro:Prot_kinase_dom |
| SMART:SM00248 | SUPFAM:SSF48403 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | UniParc:UPI000296DBCB | RefSeq:XP_006356088.1 |
| SEG:seg | : | : | : | : | : |
Description
Integrin-linked protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400013468]
Coordinates
chr3:-:869749..879249
Molecular Weight (calculated)
52862.3 Da
IEP (calculated)
7.309
GRAVY (calculated)
-0.569
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPNSPVRFK LGKQSSLAPE RRGEEVLGGE DDGFVIDIDP RVRLMYSANE GDIEGIKEIL ESGTDVNFRD IDERTALHVA ACHGSSDVVK LLLDNGAEVD
101: PKDRWGSTPL ADGIHYKNHA VIKLLEKHGA KPPMAPMHVK TCREVPEYEI DAKELDFTNS IELSKGTFHI ASWRGIQVAV KKFGEDVIAD EDKVSAFRDE
201: LALLQKMRHP NVVQFLGAVT QSSPMMIVTE YLPKGDLREY LNRKGALKPT KALRFAMDIA RGMNYLHEHK EAIIHRDLEP SNILLDDTGH LKVADFGVSK
301: LLKVTKRVKE DKPLTYEDSY RRFVAPEVFR NEEYDTKVDI FSFALILQEM IEGYPPFHAK EENDVPKLYA AKERPPFKAP AKFYAHGLKE LIEECWNDKP
401: TERPSFKQII PRLEFIYKKS DHNKRWKVIR PLNCFQHLEA MWKKDSSGLS SRNRSSRSTR HI
101: PKDRWGSTPL ADGIHYKNHA VIKLLEKHGA KPPMAPMHVK TCREVPEYEI DAKELDFTNS IELSKGTFHI ASWRGIQVAV KKFGEDVIAD EDKVSAFRDE
201: LALLQKMRHP NVVQFLGAVT QSSPMMIVTE YLPKGDLREY LNRKGALKPT KALRFAMDIA RGMNYLHEHK EAIIHRDLEP SNILLDDTGH LKVADFGVSK
301: LLKVTKRVKE DKPLTYEDSY RRFVAPEVFR NEEYDTKVDI FSFALILQEM IEGYPPFHAK EENDVPKLYA AKERPPFKAP AKFYAHGLKE LIEECWNDKP
401: TERPSFKQII PRLEFIYKKS DHNKRWKVIR PLNCFQHLEA MWKKDSSGLS SRNRSSRSTR HI
001: MTIKPKSPAR FKLGRQSSLA PESRTPIDTL TEDEDDDLAA AATAGIGDPT IRLMYLANEG DIDGINKMLD SGTNVDYRDI DARTALHVAA CQGRTDVVEL
101: LLSRGAKVDT KDRWGSTPLA DAVYYKNHDV IKLLEKHGAK PTIAPMHVLT DKEVPEYEIH PTELDFSNSV KISKGTFNKA SWRGIDVAVK TFGEEMFTDE
201: DKVNAFRDEL ALLQKIRHPN VVQFLGAVTQ STPMMIVTEY LPKGDLRQYL DRKGPLMPAH AVKFALEIAR GMNYLHEHKP EAIIHCDLEP PNILRDDSGH
301: LKVADFGVSK LLVVKKTVKK DRPVVTCLDS SWRYMAPEVY RNEEYDTKVD VFSFALILQE MIEGCEPFHE IEDREVPKAY IEDERPPFNA PTKSYPFGLQ
401: ELIQDCWDKE ASKRPTFRVI ISTLELISDR IARKRSWKVM LGRCLPRFRL FTKRDYVNPG GSNRSSGSFN R
101: LLSRGAKVDT KDRWGSTPLA DAVYYKNHDV IKLLEKHGAK PTIAPMHVLT DKEVPEYEIH PTELDFSNSV KISKGTFNKA SWRGIDVAVK TFGEEMFTDE
201: DKVNAFRDEL ALLQKIRHPN VVQFLGAVTQ STPMMIVTEY LPKGDLRQYL DRKGPLMPAH AVKFALEIAR GMNYLHEHKP EAIIHCDLEP PNILRDDSGH
301: LKVADFGVSK LLVVKKTVKK DRPVVTCLDS SWRYMAPEVY RNEEYDTKVD VFSFALILQE MIEGCEPFHE IEDREVPKAY IEDERPPFNA PTKSYPFGLQ
401: ELIQDCWDKE ASKRPTFRVI ISTLELISDR IARKRSWKVM LGRCLPRFRL FTKRDYVNPG GSNRSSGSFN R
Arabidopsis Description
Integrin-linked protein kinase family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMD5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.