CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G18950.1	EES01631	AT2G41090.1	17360592
AT4G18950.1	EES09201	AT2G41090.1	17360592
AT4G18950.1	EES16322	AT2G41090.1	17360592
AT4G18950.1	OQU78227	AT2G41090.1	17360592
AT4G18950.1	EES01631	AT2G41100.1	17360592
AT4G18950.1	EES09201	AT2G41100.1	17360592
AT4G18950.1	EES16322	AT2G41100.1	17360592
AT4G18950.1	OQU78227	AT2G41100.1	17360592
AT4G18950.1	KXG37587	AT4G14640.1	17360592
AT4G18950.1	KXG37588	AT4G14640.1	17360592
AT4G18950.1	EES01631	AT5G21274.1	17360592
AT4G18950.1	EES09201	AT5G21274.1	17360592
AT4G18950.1	EES16322	AT5G21274.1	17360592
AT4G18950.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043459_P005	Maize	cytosol	82.66	93.99
Os01t0748600-02	Rice	cytosol	86.89	87.82
HORVU3Hr1G071430.7	Barley	cytosol	83.72	84.44
TraesCS3B01G306500.1	Wheat	nucleus	84.14	84.32
TraesCS3A01G272900.1	Wheat	nucleus	83.3	84.01
TraesCS3D01G272300.1	Wheat	cytosol	83.72	83.9
GSMUA_Achr6P26030_001	Banana	cytosol	63.42	64.66
VIT_10s0003g02060.t01	Wine grape	cytosol	62.58	64.07
Solyc02g071740.2.1	Tomato	cytosol	61.73	63.34
PGSC0003DMT400073140	Potato	cytosol	61.73	63.34
GSMUA_Achr2P09520_001	Banana	cytosol	61.31	63.04
KRH11091	Soybean	nucleus	60.68	62.94
KRH21151	Soybean	nucleus	60.25	62.64
Solyc03g005920.2.1	Tomato	cytosol	60.89	62.34
PGSC0003DMT400035023	Potato	cytosol	60.68	62.12
GSMUA_Achr7P24910_001	Banana	cytosol	60.89	62.07
Bra020982.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	51.8	59.47
CDX99407	Canola	cytosol	55.39	57.08
CDX78907	Canola	cytosol	55.39	57.08
AT4G18950.1	Thale cress	cytosol	54.97	56.64
CDX76504	Canola	cytosol	54.97	56.64
Bra013363.1-P	Field mustard	cytosol	54.97	56.64
GSMUA_Achr9P00030_001	Banana	cytosol	21.99	52.0
KXG30604	Sorghum	mitochondrion	42.49	41.1
KXG33869	Sorghum	mitochondrion	37.63	37.24
EER99756	Sorghum	cytosol	34.67	37.1

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	MapMan:18.4.1.30	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
UniProt:C5XK33	EnsemblPlants:EES03608	ProteinID:EES03608	ProteinID:EES03608.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	InterPro:Kinase-like_dom_sf	ProteinID:OQU87540.1	PFAM:PF07714	PFAM:PF12796	PIRSF:PIRSF000654
PFscan:PS50011	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF7	InterPro:Prot_kinase_dom
SMART:SM00248	EnsemblPlantsGene:SORBI_3003G295200	SUPFAM:SSF48403	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI0001A84C7B
RefSeq:XP_002458488.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:62734969..62740647

Molecular Weight (calculated)

53272.4 Da

IEP (calculated)

7.180

GRAVY (calculated)

-0.590

Length

473 amino acids

Sequence
(BLAST)

001: MEPKPHAPAS GPATPRFKLG KQSSLAPERG GGEGGGVSSA EGSSAEANGV MSFQLMYLAH EGNAEGIREL LDGGADPNFR DSDGRTALHI AACEGHAEVV
101: ELLLQRGAEA AVEDQWGSTP LADAMHYQNH DVIKIFEKHG SKHKIAPMHV NNVREVPEYE IDPAELDFTN GNDLSKGTFR KATWRGIPVA VKKLDDDLIV
201: DESKVQAFRD ELDVLQLIRH PNVVQFLGAV TQSNPMMIVM EFMRKGDLRT HLSKKGALPP SYAVKLALDI ARGMNYLHEH KPQAIIHRDL EPSNILRDDT
301: GHLKVADFDL CKMLKWRKKV REDKAVTSPG NACKYVAPEV LRNEEYDTKV DVFSFALILQ EMIEGCLPYY DKKNDEIEKV HNSKERPPFR APPKHYAHGL
401: RELIEQCWSE NPADRPDFRV IINRLSAIQN EIVHRNRWKV RPLKCFLSIE GMWKKDRNEG STTRSSRSSR SYY

Best Arabidopsis Sequence Match ( AT3G58760.1 )
(BLAST)

001: MTIKPKSPAR FKLGRQSSLA PESRTPIDTL TEDEDDDLAA AATAGIGDPT IRLMYLANEG DIDGINKMLD SGTNVDYRDI DARTALHVAA CQGRTDVVEL
101: LLSRGAKVDT KDRWGSTPLA DAVYYKNHDV IKLLEKHGAK PTIAPMHVLT DKEVPEYEIH PTELDFSNSV KISKGTFNKA SWRGIDVAVK TFGEEMFTDE
201: DKVNAFRDEL ALLQKIRHPN VVQFLGAVTQ STPMMIVTEY LPKGDLRQYL DRKGPLMPAH AVKFALEIAR GMNYLHEHKP EAIIHCDLEP PNILRDDSGH
301: LKVADFGVSK LLVVKKTVKK DRPVVTCLDS SWRYMAPEVY RNEEYDTKVD VFSFALILQE MIEGCEPFHE IEDREVPKAY IEDERPPFNA PTKSYPFGLQ
401: ELIQDCWDKE ASKRPTFRVI ISTLELISDR IARKRSWKVM LGRCLPRFRL FTKRDYVNPG GSNRSSGSFN R

Arabidopsis Description

Integrin-linked protein kinase family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMD5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.