Factsheet for Solyc03g005920.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008950.2.1
Solyc03g005240.1.1
Solyc06g053930.2.1
Solyc10g077010.1.1
Solyc10g081170.1.1
Solyc11g072240.1.1
Solyc12g099990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G18950.1	Solyc01g008950.2.1	AT2G41090.1	17360592
AT4G18950.1	Solyc10g077010.1.1	AT2G41090.1	17360592
AT4G18950.1	Solyc10g081170.1.1	AT2G41090.1	17360592
AT4G18950.1	Solyc11g072240.1.1	AT2G41090.1	17360592
AT4G18950.1	Solyc12g099990.1.1	AT2G41090.1	17360592
AT4G18950.1	Solyc01g008950.2.1	AT2G41100.1	17360592
AT4G18950.1	Solyc10g077010.1.1	AT2G41100.1	17360592
AT4G18950.1	Solyc10g081170.1.1	AT2G41100.1	17360592
AT4G18950.1	Solyc11g072240.1.1	AT2G41100.1	17360592
AT4G18950.1	Solyc12g099990.1.1	AT2G41100.1	17360592
AT4G18950.1	Solyc03g005240.1.1	AT4G14640.1	17360592
AT4G18950.1	Solyc06g053930.2.1	AT4G14640.1	17360592
AT4G18950.1	Solyc01g008950.2.1	AT5G21274.1	17360592
AT4G18950.1	Solyc10g077010.1.1	AT5G21274.1	17360592
AT4G18950.1	Solyc10g081170.1.1	AT5G21274.1	17360592
AT4G18950.1	Solyc11g072240.1.1	AT5G21274.1	17360592
AT4G18950.1	Solyc12g099990.1.1	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400035023	Potato	cytosol	97.62	97.62
Solyc02g071740.2.1	Tomato	cytosol	80.09	80.26
VIT_10s0003g02060.t01	Wine grape	cytosol	73.16	73.16
KRH11091	Soybean	nucleus	71.21	72.15
KRH21151	Soybean	nucleus	71.0	72.09
GSMUA_Achr6P26030_001	Banana	cytosol	69.05	68.75
Bra020982.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	60.17	67.48
GSMUA_Achr2P09520_001	Banana	cytosol	66.67	66.96
GSMUA_Achr7P24910_001	Banana	cytosol	67.1	66.81
CDX99407	Canola	cytosol	65.37	65.8
Bra013363.1-P	Field mustard	cytosol	64.94	65.36
CDX78907	Canola	cytosol	64.94	65.36
AT4G18950.1	Thale cress	cytosol	64.94	65.36
CDX76504	Canola	cytosol	64.29	64.71
Solyc07g055870.2.1	Tomato	cytosol	63.85	64.27
Zm00001d043459_P005	Maize	cytosol	55.19	61.3
Os01t0748600-02	Rice	cytosol	61.69	60.9
EES03608	Sorghum	cytosol	62.34	60.89
TraesCS3D01G272300.1	Wheat	cytosol	61.69	60.38
TraesCS3A01G272900.1	Wheat	nucleus	61.26	60.34
HORVU3Hr1G071430.7	Barley	cytosol	61.04	60.13
TraesCS3B01G306500.1	Wheat	nucleus	60.82	59.53
GSMUA_Achr9P00030_001	Banana	cytosol	24.68	57.0
GSMUA_Achr9P00040_001	Banana	mitochondrion	46.54	54.99
Solyc05g013070.2.1	Tomato	cytosol	39.83	42.2
Solyc08g014450.2.1	Tomato	mitochondrion	42.86	41.95
Solyc12g019410.1.1	Tomato	plastid	42.42	41.79
Solyc01g010950.2.1	Tomato	extracellular	38.31	41.16
Solyc10g017490.1.1	Tomato	cytosol	36.8	38.72
Solyc02g091160.2.1	Tomato	cytosol	10.82	30.67
Solyc02g091170.2.1	Tomato	cytosol	16.67	27.02

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	MapMan:18.4.1.30	Gene3D:3.30.200.20	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556
InterPro:IPR000719	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:K4BE15	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PFAM:PF12796	PIRSF:PIRSF000654	PRINTS:PR00109	PFscan:PS50011	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF7	InterPro:Prot_kinase_dom	SMART:SM00248	SUPFAM:SSF48403
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	EnsemblPlantsGene:Solyc03g005920.2	EnsemblPlants:Solyc03g005920.2.1	UniParc:UPI0002767614	SEG:seg

Description

No Description!

Coordinates

chr3:-:619237..627172

Molecular Weight (calculated)

53008.4 Da

IEP (calculated)

7.000

GRAVY (calculated)

-0.579

Length

462 amino acids

Sequence
(BLAST)

001: MEPNSPVRFK LGKQSSLAPE RREEQVLGGE DDGFVIDIDP RVRLMYSANE GDIEGIKEIL ESGTDVNFRD IDERTALHVA ACHGSSDVVQ LLLDNGAEVD
101: PKDRWGSTPL ADAIHYNNHA VIKLLEKHGA KPPMAPMHVK TCREVPEYEI DAKELDFTNS IELSKGTFHI ASWRGIQVAV KKFGEDVLAD EDKVNAFRDE
201: LALLQKMRHP NVVQFLGAVT QSSPMMIVTE YLPKGDLREY LNRKGALKPT KALRFAMDIA RGMNYLHEHK EAIIHRDLEP SNVLLDDTGH LKVADFGVSK
301: LLKVTKRVKE DKPLTYEDSY RRYVAPEVFR NEEYDTKVDV FSFALILQEM IEGYPPFHAK EENDVPKLYA AKERPPFKAP AKFYAHGLKE LIEECWNDKP
401: TERPSFKQII PRLEFIYKKF DHNKRWKVIR PLNCFQHLEA MWKKDSSGLS SRNRSSRSTR HI

Best Arabidopsis Sequence Match ( AT3G58760.3 )
(BLAST)

001: MMSREEENEY DTSPALRGKP LKPADWLGLF FLLFFFFSVA AVTVPFTAHI ACGRKFSPSP LLNMTIKPKS PARFKLGRQS SLAPESRTPI DTLTEDEDDD
101: LAAAATAGIG DPTIRLMYLA NEGDIDGINK MLDSGTNVDY RDIDARTALH VAACQGRTDV VELLLSRGAK VDTKDRWGST PLADAVYYKN HDVIKLLEKH
201: GAKPTIAPMH VLTDKEVPEY EIHPTELDFS NSVKISKGTF NKASWRGIDV AVKTFGEEMF TDEDKVNAFR DELALLQKIR HPNVVQFLGA VTQSTPMMIV
301: TEYLPKGDLR QYLDRKGPLM PAHAVKFALE IARGMNYLHE HKPEAIIHCD LEPPNILRDD SGHLKVADFG VSKLLVVKKT VKKDRPVVTC LDSSWRYMAP
401: EVYRNEEYDT KVDVFSFALI LQEMIEGCEP FHEIEDREVP KAYIEDERPP FNAPTKSYPF GLQELIQDCW DKEASKRPTF RVIISTLELI SDRIARKRSW
501: KVMLGRCLPR FRLFTKRDYV NPGGSNRSSG SFNR

Arabidopsis Description

Integrin-linked protein kinase family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMD5]
SUBAcon: [plasma membrane,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.