Factsheet for Solyc10g017490.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400026617	Potato	cytosol	62.64	98.21
VIT_15s0046g02840.t01	Wine grape	cytosol	50.34	72.7
VIT_15s0046g02850.t01	Wine grape	cytosol	69.7	56.67
Solyc01g010950.2.1	Tomato	extracellular	38.5	39.3
Solyc05g013070.2.1	Tomato	cytosol	38.04	38.3
Solyc03g005920.2.1	Tomato	cytosol	38.72	36.8
Solyc07g055870.2.1	Tomato	cytosol	38.27	36.6
Solyc02g071740.2.1	Tomato	cytosol	36.9	35.14
Solyc02g091160.2.1	Tomato	cytosol	12.53	33.74
Solyc08g014450.2.1	Tomato	mitochondrion	34.85	32.42
Solyc12g019410.1.1	Tomato	plastid	33.94	31.77
Solyc02g091170.2.1	Tomato	cytosol	18.91	29.12

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	MapMan:18.4.1.30	Gene3D:3.30.200.20	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004871
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556
InterPro:IPR000719	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:K4CYM7	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PFAM:PF12796	PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00107	PFscan:PS50011
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF2	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	EnsemblPlantsGene:Solyc10g017490.1	EnsemblPlants:Solyc10g017490.1.1
UniParc:UPI000276C38F	:	:	:	:	:

Description

No Description!

Coordinates

chr10:+:5462824..5469856

Molecular Weight (calculated)

49616.6 Da

IEP (calculated)

6.612

GRAVY (calculated)

-0.407

Length

439 amino acids

Sequence
(BLAST)

001: MDDNELHLSP PAEPPATQCP IVFEAKMEKR ITIPYTGLQM LPQRMESGGP YRLLHCSGLG DKEGVMQELE KGVEPNLVDY DKRTALHLAA SEGCEEIVVL
101: LLEKGADVNS TDRWGRTPLS DARNFGHENV CKILEAHDGY DPLGDSDTPC FMIGHGEVDM KDATLIGEGA YGEVYLVKWR GTEVAAKTIR ASIASNPMVK
201: NAFMKELALW QKLRHPNIVQ FLGVLKQSDR LIFLTEYLRN GSLYDQLRKK GRLDPLTAVA YALDIARGMN YLHQHKPHSI IHRDLTPRNV LQDEAGHLKV
301: TDFGLSKIAQ QKDSYGYKMT GGTGSYRYMA PEVYRRESYG KSVDVFSFAL IVHEMFLGGP SNREEAAEKV ADKTAYEDYR PHLASYIFPE QIKTLLRECW
401: HKNPDRRPSF QEIIDRLEKI HVTLQEKIVL GTCCSCMIL

Best Arabidopsis Sequence Match ( AT1G14000.1 )
(BLAST)

001: MSSDSPAAGD GGEQAAAGTS VPSPSYDKQK EKARVSRTSL ILWHAHQNDA AAVRKLLEED PTLVHARDYD KRTPLHVASL HGWIDVVKCL LEFGADVNAQ
101: DRWKNTPLAD AEGARKQKMI ELLKSHGGLS YGQNGSHFEP KPVPPPIPKK CDWEIEPAEL DFSNAAMIGK GSFGEIVKAY WRGTPVAVKR ILPSLSDDRL
201: VIQDFRHEVD LLVKLRHPNI VQFLGAVTER KPLMLITEYL RGGDLHQYLK EKGGLTPTTA VNFALDIARG MTYLHNEPNV IIHRDLKPRN VLLVNSSADH
301: LKVGDFGLSK LIKVQNSHDV YKMTGETGSY RYMAPEVFKH RRYDKKVDVF SFAMILYEML EGEPPFANHE PYEAAKHVSD GHRPTFRSKG CTPDLRELIV
401: KCWDADMNQR PSFLDILKRL EKIKETLPSD HHWGLFTS

Arabidopsis Description

VIKVIK [Source:UniProtKB/TrEMBL;Acc:A0A178W4T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.