Factsheet for PGSC0003DMT400078613

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g091160.2.1	Tomato	cytosol	34.65	91.41
Solyc02g091170.2.1	Tomato	cytosol	59.53	89.82
VIT_14s0006g02090.t01	Wine grape	cytosol	18.84	72.32
PGSC0003DMT400026617	Potato	cytosol	21.4	32.86
PGSC0003DMT400052486	Potato	nucleus, plastid	32.09	29.42
PGSC0003DMT400035023	Potato	cytosol	30.47	28.36
PGSC0003DMT400044544	Potato	cytosol	25.81	27.61
PGSC0003DMT400072865	Potato	cytosol	27.91	27.59
PGSC0003DMT400064944	Potato	mitochondrion, plastid	30.23	27.54
PGSC0003DMT400073140	Potato	cytosol	29.3	27.33

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	EntrezGene:102602873	MapMan:50.2.7	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	InterPro:Kinase-like_dom_sf	UniProt:M1D0F2	PFAM:PF07714	PFAM:PF13857
EnsemblPlantsGene:PGSC0003DMG401030595	PGSC:PGSC0003DMG401030595	EnsemblPlants:PGSC0003DMT400078613	PIRSF:PIRSF000654	PFscan:PS50011	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR44023	InterPro:Prot_kinase_dom	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI0002952F08	RefSeq:XP_015169123.1	SEG:seg	:	:

Description

Serine-threonine protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG401030595]

Coordinates

chr2:+:41678376..41684296

Molecular Weight (calculated)

49163.4 Da

IEP (calculated)

8.087

GRAVY (calculated)

-0.252

Length

430 amino acids

Sequence
(BLAST)

001: MEISTILMRH KDSSSGHFDM QMIGTFLSFA SRGDRVGLNQ MLRQGISPNV QDYDKRTALH LAASEGHASI VELLLAYKAD VNLKDRWHRT PLTDAKLYGH
101: RDICRILEVC GGKDSNSDHP LTVRREEDSI DVNIDISELN LQHSSIIEQG LFGESEKVKW RGTWVVKTVI KRVFSAKVNT LLRELRHPNI LQFLGSIVHG
201: DEMILITEYL PKGNLQDILR KRLDPPTALR YALDIARGMN YLHRHKPLPI VHNNLHLKNL LLDECGHLKI GEYWVQILDN QIYANQDCCM KTFWFLLICL
301: FIYFGSHTAA YNQSLSFTGQ SNNGCNLISH LCHDISKDIY SFGLIFYQML EGRQITDRSF ETMHIKSVDL EKKLYTGRYP SRILQLIEDC TSTVTSTRPS
401: FATVIEILEE VSLLSRKTGC PPCNKSKSPK

Best Arabidopsis Sequence Match ( AT2G31800.1 )
(BLAST)

001: MANVVGQLKR GISRQFSTGS LRRTLSRQFT RQASHDPRRN NMRFSFGRQS SLDPIRRSPD GSNGPQLAVP DNLDATMQLL FVACRGDVEG VQDLLDEGID
101: VNSIDLDGRT ALHIAACEGH VDVVKLLLTR KANIDARDRW GSTAAADAKY YGNMDVFNIL KARGAKVPKT KRTPMVVANP REVPEYELNP QELQVRKADG
201: ISKGIYQVAK WNGTKVSVKI LDKDLYKDSD TINAFKHELT LFEKVRHPNV VQFVGAVTQN VPMMIVSEYH PKGDLGSYLQ KKGRLSPAKV LRFALDIARG
301: MNYLHECKPE PVIHCDLKPK NIMLDSGGHL KVAGFGLISF AKLSSDKSKI LNHGAHIDPS NYCMAPEVYK DEIFDRSVDS YSFGVVLYEM IEGVQPFHPK
401: PPEEAVKLMC LEGRRPSFKA KSKSCPQEMR ELIEECWDTE TFVRPTFSEI IVRLDKIFVH CSKQGWWKDT FKFPWK

Arabidopsis Description

At2g31800 [Source:UniProtKB/TrEMBL;Acc:Q1JPN7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.